Oncorhynchus tshawytscha (Chinook salmon): 112257954
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Entry
112257954 CDS
T05605
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00780
Biotin metabolism
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
112257954 (hlcs)
Enzymes [BR:
otw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
112257954 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
112257954 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
112257954 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
112257954 (hlcs)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
112257954
NCBI-ProteinID:
XP_024287687
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All DBs
Position
LG09:39466148..39510967
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AA seq
987 aa
AA seq
DB search
MTICSGKSHSVNNREARVGSNLSREAIPYGLKNGFPNVKKMLITLCYVYLWVRFQKCYTV
VIRSTLHKLCGGSKTNASNVSFTFCALNPLGKPRLQKGQPTCLQSVNKQLSPPLPEEDVF
LKLGDKAIYITELQACEDLSKWTLLWGSSLSCGPRIENISFIIEATSGQRVGSQAHHTTE
NKKVLKWSDYCLPLACSPLHPFRAVAQASVDNFSRLGVAFMEDRLQLDNGLVPSKIVSVL
LRESAFKELLEKGKLEKHITSLSLKKQTEIILSEPSPCECELLSVRGDLQLTQNRKCSLL
QPPEIQRALVERRGSEHLRGASPGVDSGDNSLGINHQHMEGHGRHLHLSSCHECLELENS
TILSVKYASVDNIPDIPDDYTTCTDSGDETLDEFEEDEAESFVGQSRRVNVTGKPPNVLV
FTGGCQEKFQRVRLLLGECIDMDSYTVYPLRPQQALSEPWLESATLLVLASDEPLTPQLQ
ARFLAYLEQGGRVLGLSSTLCPTGLALVPRKSRRSQICRLSFTKADTTELDLSVLASGSV
FVRELQSGGVPGETEVWGELKWDGDGGDKDMVIVRVTRGEDRGEAVLCQVHLETAPNSED
IGSSQGFDELKMSNARRYEVLTEIITSLGLSCEQSQAPPASPVYLLATSEERRASFLKWL
HTQLDKEGLLKCSKAFLKVVPSSELQAGPPLLPKGTLALVTDAPEAQSWEQFSLQTYSQH
LETRTLGRTLLYTQVTPTTMDLLEGLMLQLPEKMGLTAVAARQTQGRGRGGNAWLSPLGC
AMFSVHVQVAVSSRLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIYYGNLMK
LGGVLVTSTVMGPTFHLLIGCGFNVSNSNPTIAINDLVMQHNREHGTSLEALSSAQLIGR
TLTCLEQLISDFQERGSEAVLPLYYKRWMHNGTQVRLWSEDGPQAVVVGLDDNGFLQVRS
EEQGVVSVQPDGNSFDMLRNLVVTKQH
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttgtagtgggaagagccattctgtcaacaacagggaagccagggtcgggtcg
aatctgagcagagaggccataccatatgggctcaaaaacggctttccaaatgtaaagaaa
atgctaataacgttgtgctacgtctacctttgggtgcgctttcaaaagtgctacacagtg
gtaattcggagcaccctgcacaaattgtgcggggggagcaaaaccaatgcaagtaacgtt
agcttcacattctgtgccttgaatcccctggggaagcctcgacttcagaaaggacaacca
acctgcctgcaaagtgtcaataagcagctcagtccacctctgcctgaggaggacgttttt
ctcaagttgggcgacaaggctatttacataaccgaacttcaggcatgtgaggacctcagc
aagtggactcttttgtgggggtcctctctgagttgtggcccacggatagaaaacatttct
ttcatcatagaggctacatcaggacaaagagtgggcagccaggctcatcacactacagaa
aataaaaaagtgctgaagtggtcagactactgtctccctctggcctgtagcccattgcat
ccgttcagggccgtggctcaggccagcgttgacaacttcagccgccttggggttgcgttt
atggaagatcgccttcagctggacaatggactagtgccttcaaagatagtctctgtcctg
ctccgagaatctgcgttcaaagaacttctggagaaaggaaagttggaaaagcacatcact
tccctctccctcaaaaaacagactgagatcatactctctgagccttctccctgcgagtgt
gagctactctcagtgagaggcgacctccagctaacacaaaataggaagtgcagcctgctc
caaccgccagagatccagagagctttagtggaaagacgaggctccgagcacctacgagga
gccagccctggggtggacagcggggacaactcacttggcatcaaccaccagcacatggag
ggccacggccgccacctccacctctccagctgccacgagtgcctggagctggagaacagc
accatcctctccgtcaagtacgcctcggtcgacaacatccctgacattcccgacgactac
accacgtgcacggacagcggagacgagactctggacgagtttgaggaggatgaggcagag
agctttgttggtcaaagccggcgggtcaatgttaccgggaagccccccaacgtgctggtg
ttcacgggtggctgccaggagaagttccagagggtgcgtttgctgctgggcgagtgcatc
gacatggacagctacacggtgtaccccctgaggccccagcaagccctcagtgaaccctgg
ctggagagtgccaccctgctagtgctggcctcagacgaaccccttaccccccagctccag
gcccgtttccttgcatacctggagcagggtggcagggtcctggggctctcctccaccctc
tgccccacggggctggctctggtgcccaggaagagcaggaggagccagatctgcaggcta
agcttcacaaaggctgataccacagagctggatctaagcgtgcttgccagcgggagtgtg
tttgtcagggagctgcagagtggtggggtccctggagagacggaagtctggggggagctg
aagtgggacggagatggtggagacaaggacatggtcatcgtcagggtgacgcgtggagag
gaccgaggggaggctgtgctgtgtcaggtgcacctggaaacggcccccaactctgaagat
attgggtcgtctcagggttttgacgagctgaagatgagcaatgcgcggcgctacgaggtc
ctgacggagatcatcacctccctgggcctgagctgtgagcagagtcaggccccgcccgcc
agccctgtctacctccttgccacctctgaggagcgcagggccagcttcctcaagtggctg
cacacccagttggacaaggaagggctgctcaagtgttccaaggcattccttaaagtggtc
cccagctcagagcttcaggctgggccccccctgctgcccaaggggaccctggccctggtc
acagatgccccagaggcccagagctgggagcagttcagcctgcagacctacagccagcac
ctggagacccgcacgctgggacgcacccttctctacactcaggtcacccctaccaccatg
gacctactagaggggttgatgctccagctgcctgagaaaatggggttaactgctgtagcg
gctcgacagacccagggtagaggccgtggggggaatgcgtggctgagtcctctggggtgt
gccatgtttagtgtgcatgtgcaagtggctgtgagttccagactgggccagaggatcccc
ttcctgcagcacctggctgccctggctgtggtggaggccgtacgcacccttcccggttac
caggacatcgacctaagggtgaagtggcctaatgacatttactacggtaacctgatgaag
ctaggaggagtgttggtgacatcaacagttatgggaccaaccttccatctcctcattggc
tgtggctttaacgtcagcaacagcaaccccaccattgccatcaacgacctggtgatgcag
cacaaccgagagcatggcacaagcctggaggcacttagctcagcccagctcatcggccgc
accctcacctgcctggagcagctcatctctgacttccaagaacgggggtcagaggccgtc
ctacccctctactacaagagatggatgcacaatgggacccaggtgcgtctgtggagtgag
gatggccctcaggctgtcgtggtgggcctcgatgacaacggcttcctgcaggtgcgctcc
gaggagcagggcgtggtctccgtgcagcctgacggcaactcctttgacatgctaaggaac
ctggtggtcaccaagcaacactag
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