Oncorhynchus tshawytscha (Chinook salmon): 112260412
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Entry
112260412 CDS
T05605
Name
(RefSeq) paired box protein Pax-3-like isoform X1
KO
K09381
paired box protein 3/7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112260412
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112260412
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_23
Homeobox_KN
HCV_capsid
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
112260412
NCBI-ProteinID:
XP_042184636
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Position
LG10:complement(51565660..51602378)
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AA seq
492 aa
AA seq
DB search
MTALAGGIPRMMRPNPHQNYPRGGYSLEVSTPLGQGRVNQLGGMFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGSIGGSKPKQTTTPDVDKKIEE
YKKDNPGMFSWEIRDKLLKDGICDRNNIPSVSSISRIMRCKFGGVGGEDEEDDDEIQKRE
LEENERRAKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFSAEQLEELERAF
ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSA
MSSLQPYQLSDTPYPPTSISQTVSEQHSTVHRPQPLPPTSVHQGGLGSSVGTQDGSSAYC
LSSGRHGFSGYSDSFVPPPGHSNPVNPSISNGLSPQVMGLLNPGGVPHQPSHQSDFALSP
LTGGMEPGGGMAASCHGSQRGLEGLPGLTSMPTLPNSQSYCPPTYSSPAYAMDHHPSYQY
GQYGQSKVPFII
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacagcactagcggggggcataccgaggatgatgcgcccgaacccacaccaaaactac
ccgcggggaggctactctctggaagtctctaccccgttaggccagggccgggtgaaccag
ctcggtgggatgtttatcaacggcagacccctgcccaaccacatccgccacaagatcgtg
gagatggcccaccacggcatccgaccctgtgtcatctcccgccagctccgagtctcccat
ggatgcgtgtccaaaatcttgtgccggtaccaagagacaggctccatcaggcccgggtcc
atcggaggcagcaaacccaagcagacaacaaccccagatgtggacaagaagatcgaggaa
tacaagaaagacaacccgggcatgttcagctgggaaatcagggataaattactcaaagat
gggatctgcgacagaaacaacatcccctcagtgagttcaatcagccgtatcatgcgttgt
aaattcgggggagttggaggagaagatgaggaggacgatgatgaaatccagaaaagggaa
ttggaagagaacgaaagacgagcgaaacacagcatcgacggcatcctcggggatagatcc
agccactcagacgagggttcggacgtggactccgagccgggcctgccactaaagaggaaa
cagcgtcgcagtaggaccaccttctcagccgagcagctggaggagctggagagagccttt
gaacgaacacactaccctgatatatacaccagagaagagctagctcagagggccaaactc
acagaagccagagttcaggtgtggttcagcaacaggagagccaggtggaggaaacaggca
ggagccaatcagctaatggcatttaatcacctgatccccggcggtttcccaccttcggcc
atgtcgagcttgcagccatatcagctgtcagacaccccctaccctcccacctccatctca
caaacagtgtcagagcagcacagtacggtccacaggcctcagcctctcccccccacctcg
gtgcaccagggtgggcttggctcctcagtggggacccaggacgggagttcggcctactgc
ctgtcctccggacgccacggcttctcaggctactcagacagctttgtgcccccccctggc
cactccaacccagtcaaccccagcattagcaacggcctctcaccgcaggtgatggggctg
ttgaacccgggaggagtgccccaccagcctagccaccagagtgactttgccctctctccc
ctgactggtgggatggagcccgggggtggtatggcggccagctgccacggctcccagcgg
ggcctggagggtctgccaggcctgaccagcatgcccaccctgcccaactcccagtcctac
tgcccgcccacctacagttccccagcctacgctatggaccaccacccctcataccagtac
ggacagtatggacagagcaaggtgcctttcattatctga
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