Oncorhynchus tshawytscha (Chinook salmon): 112261287
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Entry
112261287 CDS
T05605
Name
(RefSeq) mineralocorticoid receptor isoform X1
KO
K08555
mineralocorticoid receptor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112261287
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112261287
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112261287
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
112261287
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112261287
NCBI-ProteinID:
XP_042185601
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All DBs
Position
LG11:complement(1542272..1639796)
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AA seq
1043 aa
AA seq
DB search
METKRYPSFFEGSTDTEKNRWSHVPSSAMDYCCSGAEEADSLNLNSNSDVLMDIVNVSCS
PSSNTADSKESNNNNEEKKKPEQQPTLKLTQNQHQPFVLPLFNSSLHGRKPEMMDSKELS
KTVAESMGLYMNAAREATDFGGFGQQGGHCSPGKMYPAGVCGRPCLEDSQCAASGGSPKL
KSPSTGFPKQPSSTPGDCCSSGTPAGSAVLGLSLSCSPQTPSSISSPGGSNNLVSSTTSP
TCFGGPFACTTISNPVNQHNAAGPALAHNHVHRRNSATCSPAGSSTVGSPPLTSPLNVMR
SPISSPQSMSSVLSPPSCSTSTNMRSSSVSSPTGSTNNMRASLSISSPTTGGPMAMSSSP
RNPSGGGGGFAVSSPASELGLVQNDSNSPEGRRDQQDFKEFEFPKVESVDGEMFNVGLDH
MGMVKFIKNEPDTDYRSMCLGNGSNNTKCNQASGCPGNGSPFITQVKSEPNKDGGGCMNP
QCYTEQQQQHSMGLFQSGPSEITYLSLRDNIDEYSLSGILGPPGTEMNGSYEAGVFPHNL
LSKVKQENNDGSYYQENNNNVVPTSAIVGVNSGGHSFHYQIGAQGTMSFSRHDPRDHGTN
PLLNLISPVTALMESWKSRPGMSQGPRGEGYPGHGCMPDSMSSASLRHPSSTAKVCLVCG
DEASGCHYGVVTCGSCKVFFKRAVEGRKSQHNYLCAGRNDCIIDKIRRKNCPACRVRKCL
QAGMNLGARKSKKLGKLKGVNEDSTPTKEGGQTCPGSGGGGGYLSSGEKELSTSPTNALV
PHGPGGGLVTPYLPPSICSVLELIEPEVVFAGYDNTQPDTTDHLLSSLNQLAGKQMIRVV
KWAKVLPGFRGLPIEDQITLIQYSWMCLSSFSLSWRSYKHTNGQMLYFAPDLVFNEDRMQ
QSAMYDLCLGMRQVSQEFVRLQLTYQEFLSMKVLLLLSTVPKEGLKNQAAFEEMRVNYIK
ELRRSVGKATNNSGQTWQRFFQLTKLLDAMHDLVGNLLDFCFYTFRESQALKVEFPEMLV
EIISDQIPKVESGNTHTLYFHKK
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaaagatacccaagtttcttcgaaggatccacggacacagagaagaacaga
tggtcccatgtccccagcagtgccatggactactgctgcagcggagccgaggaggccgac
agcctgaacctgaacagcaacagtgatgtcctgatggacatagtcaatgtcagctgctcc
cccagcagcaacacagccgacagcaaggagagtaacaataacaacgaagagaagaagaag
ccagagcagcagcctactctcaaactgacccagaaccaacaccagccttttgttctcccc
ctctttaacagttccctccatgggaggaagccagagatgatggactccaaggagctgtcc
aaaactgtggctgagtccatgggcttgtatatgaacgcggccagggaggccacagacttt
ggcggcttcggccaacaggggggtcattgtagtccggggaagatgtacccagcgggagtt
tgcgggcgcccctgtctcgaggacagccagtgtgctgcgtccggggggagccccaaattg
aagtccccttctactgggttcccgaagcagcctagctccaccccaggggattgctgctca
tctggaaccccagcagggtcagccgtcttgggcttgtctctgtcctgcagcccccagacg
cccagctccatctccagccccgggggcagcaacaacctagtttcgtccaccaccagcccc
acctgctttggggggccgttcgcctgtacgaccatcagtaaccccgtcaaccagcataat
gctgccggaccagctctggcccacaaccacgtccacaggaggaactctgccacctgcagc
ccggcaggctccagcacggtggggtcgcctccgctcaccagccccctcaacgtgatgcgc
tcgcccatctccagccctcaaagcatgagcagcgtgctctccccaccgtcatgcagcacc
tctaccaacatgaggtcatcgtctgtctccagccccactggcagcaccaacaacatgagg
gcttcattgtctatctccagtccgaccaccgggggccccatggcaatgtcctcgagcccc
aggaacccctctggcggtgggggtggttttgctgtgtccagtcctgctagtgaactgggc
ctggtccagaatgactccaacagtcccgaaggacgaagagaccagcaggacttcaaggag
tttgagttccccaaggtggagagcgtggacggggagatgttcaacgtaggcctggaccac
atgggtatggtaaagttcatcaagaatgaacccgacacggactataggagcatgtgtctg
ggtaatggtagcaacaacacaaagtgtaaccaggccagcggctgccccggcaatggctca
cctttcatcacacaggtaaaaagtgagccaaacaaagatggcggcggatgcatgaatcct
cagtgctacactgagcagcagcagcaacactctatgggtctcttccagtcaggtccgtcc
gagattacctacttgtctctgagggacaacattgacgaatacagtctctctgggatcctg
ggacctccgggcacggagatgaatggcagttacgaagccggcgtgttcccccacaacctc
ctgtctaaagttaaacaagagaacaacgatggcagctactaccaagagaacaacaacaac
gttgtgcccacctcggccattgtgggtgttaattcaggcggacactcgtttcactaccag
atcggagcgcaggggacaatgtctttctcacggcacgaccctagggatcacgggacgaac
cccttgttgaatctaatttcgcctgttaccgcgttaatggagtcgtggaaatcccggccc
ggcatgtcgcagggtccaagaggagagggctatcctggtcacggctgcatgccagacagc
atgtcaagcgcatcgctgagacacccgtcgtccacagccaaagtgtgtctggtttgcggg
gacgaggcgtcgggatgtcactacggggttgttacatgcggcagctgcaaggtcttcttc
aagagagccgtagaaggtaggaaaagccagcacaactacctgtgtgccggaagaaatgac
tgtatcatcgataagatccggaggaaaaactgtccggcctgtcgagtacggaagtgtctc
caagccgggatgaatctcggagcgcggaagtctaagaagctaggcaagctgaagggtgtg
aacgaagactcgacccccaccaaggagggggggcagacgtgccctggatctggaggtgga
ggggggtacttgtcctcgggagagaaggagctgagcaccagccccactaacgccctggtg
ccccacggccctggaggtgggctggtgaccccctacctgcccccctccatctgcagcgtg
ttggagctgattgagccagaggtggtgtttgcgggctacgacaacacccagcctgacacc
accgaccacctgctgtccagcctcaaccagctggctgggaaacagatgatccgcgtggtc
aagtgggccaaagtacttccaggtttccggggcctgcccatagaggaccaaatcaccctg
atccagtactcttggatgtgtctgtcctccttcagtctcagctggaggtcctacaaacac
accaacggacagatgctctacttcgcccccgacctcgtcttcaacgaggaccgcatgcag
cagtcagccatgtacgacctgtgtctgggcatgaggcaggtgagccaggagtttgtcagg
ctgcagctcacctaccaagagttcctctccatgaaagtgttgctgctgctcagcacagtt
cccaaagagggcctaaagaaccaggcagcgtttgaggagatgagagtgaactacatcaag
gagctgaggaggtctgtgggcaaggccaccaacaactctggacagacgtggcaacgcttc
ttccagctcaccaagctactggacgccatgcatgatctggtggggaacctgctagacttc
tgtttctacacgttccgtgagtctcaggctctgaaggtggagtttccagagatgctggtg
gagataatcagtgaccagataccaaaggtggagtcgggcaacacacacaccctctacttc
cacaagaagtga
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