Oncorhynchus tshawytscha (Chinook salmon): 112262239
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Entry
112262239 CDS
T05605
Symbol
xdh
Name
(RefSeq) xanthine dehydrogenase/oxidase isoform X1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00230
Purine metabolism
otw00232
Caffeine metabolism
otw00983
Drug metabolism - other enzymes
otw01100
Metabolic pathways
otw01232
Nucleotide metabolism
otw04146
Peroxisome
Module
otw_M00546
Purine degradation, xanthine => urea
otw_M00958
Adenine ribonucleotide degradation, AMP => Urate
otw_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
112262239 (xdh)
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
112262239 (xdh)
09111 Xenobiotics biodegradation and metabolism
00983 Drug metabolism - other enzymes
112262239 (xdh)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112262239 (xdh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112262239 (xdh)
Enzymes [BR:
otw01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
112262239 (xdh)
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
112262239 (xdh)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of breast milk
112262239 (xdh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_1
MoCoBD_2
FAD_binding_5
Ald_Xan_dh_C
Fer2_2
CO_deh_flav_C
Fer2
MinC_C
Motif
Other DBs
NCBI-GeneID:
112262239
NCBI-ProteinID:
XP_042186203
LinkDB
All DBs
Position
LG11:50328783..50386783
Genome browser
AA seq
1390 aa
AA seq
DB search
MSDLTYGEQTNRNNLTDHNMSGDELVFFVNGKKITEKHADPEMTLLTYLRRKLGLTGTKL
GCAEGGCGACTVMLSKYQPHLSKVLHHSVNGCLAPLCSLHHCAVTTVEGIGSVAGKLHPV
QERIAKSHGSQCGFCTPGIVMSMYALLRNNPTPRMADIEEAFQGNLCRCTGYRPILEGYK
TFTKERSCCGGKGMENGCCMTNRGETKGYTDESVNRTSVLPAPLYNPADFLPLDPTQEII
FPPELMSLCKGQSSQQLRFRGERVLWLQPASLDQLLELKTQYPNAKMVVGNTEVGIEMKF
KNLLYPVILAPGYIPELNTIQHTNEGIVFGASCSLTLLGDVLKAAVGKLPPYQTEVFNAV
LEQLRWFAGLQIRNVAAIGGNIMTASPISDLNPVFMAAGCKLTLMSKGGERVVVMDEKFF
PGYRKTILTPEEVLLCVLIPYTKKGQYFAAYKQSPRREDDISIVTSGMSVTFAEGSTVVK
HLALSYGGMAATTVIAKNTASRLLGKQWGEELLQDACSSLAEEMTLHPSAPGGMVTYRRT
LTLSLFYKFYLTVQQKLVSEGAYIEGVRADYISATEIYHQTPPSSVQIFQAVPDGQKEED
VVGRPMMHLSALKQATGEAVYCDDIPLYENELYLCLITSTKAHATIQSIDTAEAESMPGV
VTCVFAKDIPGSNMTGPIVYDETVLADDTVTCVGHIIGAVVADTQAHAQRAAKAVRITYQ
ELQPVIITIQDAITHQSFFQPVRTIQRGDLDQGFTQADHILEGEMHMGGQEHFYLETNVT
VAVPKGEDGEMELFVSTQSATKTQSLVAKVLGVPASRVVIRVKRMGGGFGGKESRSTTLS
TMVAVAAQKLKRPVRCMLDRDEDMLVTGGRHPFYGCYKVGFMKSGKVVALEVTYYSNAGN
SMDLSLSIMERALFHMENSYSIANIRGRGYICKTHLPSNTAFRGFGGPQGMLIAESWMSD
VALSLGLPAEQVRRLNMYIQGERTPYSQILDHITLDRCWDQCLEISSFTQRRAGIETYNR
DHRWTKRGLSVVPTKFGISFTAAFLNQAGALAHIYTDGSVLLTHGGTEMGQGLNTKMVQV
ASRTLGIPSSKIHITETSTNTVPNTSPTAASASSDLNGAAVHNACEILLHRLEPYKTKNP
KGCWEDWVNAAYLICFQVNAAYLICFQVNAAYLICFQVNAAYLDRVNLSANGFYKTPDLG
YDFETNTGRPFNYFSYGVACSEVEIDCLTGSHKNIHTSIVIDVGNSLNPALDIGQVEGGF
MQGVGLYTLEELKYSPEGYLFTRGPGMYKIPAFGDIPTDLTVSLLRDAPNDKAIFSSKAI
GEPPLFLAASVFFAIKDAIIAARKESGLSGPFRLDSPATPERIRNACEDRFTKLCPPAEP
GTFTPWAVVV
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacctgacctacggagagcagactaacaggaataatctgacggatcacaacatg
agcggagatgaacttgttttctttgtaaatggaaaaaagataacagagaaacatgctgat
ccagagatgacactgctgacatacctcaggagaaagttgggtttgacaggtactaagctg
ggctgtgcagagggaggatgtggagcctgtactgtgatgctctccaaatatcagccccac
ctcagcaaagtgcttcaccactcggtgaatgggtgtctggcccctctgtgttctctccat
cactgtgctgtcaccacagtggaaggcatcggcagcgtggcagggaaactccaccccgta
caggagcgtatcgctaagtctcatggttctcagtgtgggttctgtaccccaggtatcgtc
atgtctatgtatgctctgctcaggaacaaccctacaccccgcatggctgacatagaggag
gcgttccaagggaacctgtgtcgctgtactggttacagaccaattctggaggggtacaag
acgttcaccaaagagaggagctgttgtggtggcaaagggatggaaaacggctgctgcatg
accaacagaggagagaccaaagggtacactgacgagagtgtcaacagaacctcagtgctg
cctgctcctctctacaacccagctgacttcctccctctggaccccactcaggagatcatc
ttcccaccagagctgatgtccctgtgtaaaggccagtcctctcaacagctgaggttcaga
ggagagagggttctgtggcttcagccagcttctctggatcaacttctagagcttaagact
cagtaccccaacgccaagatggtggttggtaacacggaagtcggtattgagatgaagttt
aagaacctgttgtatcctgttattctggccccgggatacatccccgagctcaacaccata
cagcacactaacgagggtatagtatttggagcgtcctgttccctgaccctgctgggtgat
gtgctgaaggctgcggtgggtaaactgcccccctaccagactgaagtcttcaacgctgtg
ctggagcaacttcgctggttcgctggactacagatacgcaacgtggcagccattggaggt
aacatcatgactgccagccccatctctgacctcaaccctgtctttatggctgctggatgc
aagcttacgctcatgtccaaaggtggtgagcgtgtggttgtgatggatgagaagttcttc
ccaggttacagaaagaccatcctgacacctgaggaggttcttctatgtgtcctgatcccg
tacaccaagaagggtcagtactttgctgcctataagcagtctcctcgtcgtgaggatgac
atcagcattgtgacgtcagggatgagtgtgacattcgccgaggggtcaaccgtcgtcaag
cacctggcccttagttacggagggatggctgctactactgtcatagctaagaacacagcc
agcagacttctgggaaaacagtggggggaagagcttctgcaggatgcttgttcctcattg
gctgaggagatgacccttcacccctctgcgccgggtggcatggtgacctaccgacgaact
ctgaccctcagcctgttttacaagttttacctgactgtacaacagaaactggtcagtgag
ggtgcatatatagagggtgtcagagctgactacatcagtgctacagagatctaccaccag
acgcctccctccagtgtccagattttccaggcggttccagacggtcagaaggaggaggac
gtggtgggccgtcccatgatgcacctctcagccttgaagcaggcgacaggcgaggcggtt
tactgtgacgacatccctctctacgagaacgaactgtacctctgtcttataaccagcacc
aaggcccacgcaaccatacaatctatagatacagcggaggcagagagtatgccaggagtg
gtgacgtgtgtgttcgccaaggacatccctggcagcaacatgacaggacctatcgtctac
gacgagactgtcctcgctgatgacacggtgacgtgtgtgggccacatcataggagcggta
gtagcagacactcaggctcacgctcagagagcagccaaggccgtgaggatcacctaccag
gaactacagcctgtaatcatcaccatacaggatgccattacccaccagtccttcttccag
ccggttagaaccatccagaggggagacctggaccaagggttcacacaggctgaccacatc
ctggagggtgagatgcatatgggaggccaggaacacttctacctggagaccaacgttact
gtagctgtacctaaaggagaggatggagagatggagctgtttgtctctactcagtctgct
accaagacccagtctctggttgctaaggtgttgggtgtcccggccagtagagtggtgatc
agagtgaagaggatgggaggaggattcggagggaaggagagcaggtcaaccaccctgtct
accatggttgctgtggctgcgcagaagttgaagaggccagtgagatgtatgttggataga
gatgaagacatgctggtgacgggaggacgacaccccttctatggatgttacaaggtgggc
tttatgaagtcaggtaaagtggtggctctggaagtgacctactacagcaacgcaggcaac
tccatggacctctctctctcaatcatggagcgtgcgttgttccacatggagaactcttac
agcatcgctaacattagagggcgtggctacatatgtaagacacacctcccgtccaacaca
gccttccgagggtttggcgggccacaaggaatgttgattgctgagagttggatgagtgat
gtagctctgagcctcgggctgcccgccgaacaggtacgtcgtctgaacatgtacatccag
ggagagaggactccttacagccagatcctggatcacatcactctggaccgctgctgggac
caatgtctggagatatcatccttcacccaacgtagagctggaatagagacatacaacagg
gaccaccgttggactaagcgagggctgtctgttgtccccaccaagtttggtatcagcttc
accgctgccttccttaaccaggccggtgcattggctcatatttacacagacggctccgtg
ctgttgactcacggagggactgagatgggacagggtctaaacaccaagatggtgcaggtg
gccagtaggaccctgggtatccccagcagtaagatccacatcacagagaccagcaccaac
actgttcccaacaccagccctactgctgcctctgcttcctccgacctcaacggagccgct
gtgcataatgcgtgtgagatcctactccaccgtctagaaccctacaagaccaagaatcct
aaaggatgctgggaggactgggtgaacgctgcctacttgatctgttttcaggtgaacgct
gcctacttgatctgttttcaggtgaacgctgcctacttgatctgttttcaggtgaacgct
gcctacttggaccgggtcaatctgtctgctaatggattctacaagactccagaccttggt
tatgactttgagaccaacacaggtcgtcctttcaactacttcagttatggagtggcctgc
tctgaggtggagatagactgtctgaccggcagccacaagaacattcatacgtccatcgtc
atagatgtggggaatagtctgaacccagctctggacataggacaggtagaggggggcttt
atgcagggtgtgggtctgtacaccctggaggagctgaagtattctcccgagggatacctg
ttcacgcgaggaccaggcatgtacaagatccccgcctttggagacatccccactgacctc
acagtgtctctgctccgagacgcccccaacgacaaggccatcttctcctccaaggcaata
ggtgagcctcctctcttccttgcggcctctgtgttttttgccatcaaagatgccatcatc
gctgccaggaaggagtcaggccttagtgggcccttcagattggacagcccggccacacct
gagaggatacgcaacgcctgcgaggatcgcttcaccaaactgtgcccccctgcagagcca
ggcaccttcactccatgggctgtcgtagtgtaa
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