Oncorhynchus tshawytscha (Chinook salmon): 112264020
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Entry
112264020 CDS
T05605
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112264020
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112264020
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GFIT
Motif
Pfam:
SNF
NADH_dh_m_C1
Motif
Other DBs
NCBI-GeneID:
112264020
NCBI-ProteinID:
XP_024296401
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Position
LG12:40407121..40423546
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AA seq
623 aa
AA seq
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MRIFCASEACQFFFKLTCSDGRLAFDSPSTMTRQDTATPTGSLSAQGPSNTGYNNNPAPV
PVITQTNSRDKWSKKMDFLLSVIGFAVDLGNVWRFPYICYQNGGGAFLIPYIVMAIFGGV
PLFYMELALGQFHRTGAISIWKHICPIFKGIGYAICVIALYVSFYYNTIIAWALFYFYSS
FASVLPWTNCDNAWNTENCTNYFLKDNVTWNNYSRSPAEEFYTRNVLEIHKSDGLHNVGG
VRWQLMLCLFLIFTIVYFSLWKGVKTSGKVVWVTATLPYVVLFILLIRGATLPGAWKGVV
FYLKPKWEKLFETSVWVDAAAQIFFSLGPGFGVLLALSSYNPFTNNCYRDAIVTSLVNCL
TSFMSGFVIFTVLGYMAEKRNVNVEDVARDKGPSLLFITYPEAIANMTGSTFFAIIFFVM
MITLGLDSTFGGLEAIITAVMDEYPGYLANRRELFVLGLVVVCFLGSLSTLTNGGAYVVK
LLEEFGVGSSIIAVGFLEAIAVSWFYGITRFSNDIKSMLGYSPGLFWKVCWVAISPAFLA
YIIVSSLLKPPPLQLFDYKYPDWSITVGYVIGASSFMWIPIYMVYKLVWTPGSLKQRLAV
CLRPERTIMPEIHADSLNMSPVP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcttctgtgcctctgaagcttgtcagttttttttcaaacttacctgctcagac
ggcagactggcgtttgatagtccgtcaaccatgacccgccaagacacagcgaccccaacg
ggaagcctgagcgcacagggcccctcaaacaccggttacaacaacaacccagcgccggta
cctgtgatcacacagacgaactcaagagacaaatggagcaaaaagatggattttctttta
tcagtcattggcttcgcggtagacttaggaaacgtttggagatttccatacatttgttac
caaaatggaggcggggctttcctcatcccctacattgtcatggccatctttggaggtgtg
ccactattttacatggaactggccctgggacagttccacagaactggcgccatatccata
tggaaacacatatgccccatcttcaaaggcattgggtatgcgatctgtgtcatcgcgctg
tacgtctccttctactacaacaccatcatcgcctgggcacttttctacttctactcgtcc
ttcgccagcgtcctgccctggactaactgtgacaacgcctggaacactgaaaactgcacc
aactacttcctgaaagacaatgtgacctggaacaactactccaggtcacctgctgaggaa
ttttacacgaggaatgttctggagatccacaagtccgatgggctgcataacgtggggggt
gttcgctggcagctgatgctctgcctctttctcatcttcactatcgtttacttcagtctc
tggaagggagtgaagacatcagggaaggtagtgtgggtgacggccaccttgccctatgtg
gtgctcttcatcctgttgatccgtggtgccaccctaccaggtgcatggaagggagtggtc
ttctacctaaagccaaaatgggagaaactcttcgagaccagtgtgtgggtagacgctgcg
gctcagatcttcttctccttggggccaggctttggggtgctccttgccctctccagctac
aacccattcacaaacaactgttatcgtgacgccatagtgaccagcctggtgaactgcctg
accagcttcatgtctggttttgtgatcttcactgtgctggggtacatggcagagaagaga
aatgtgaatgtggaggatgtagccagagacaagggtccaagcctactcttcatcacctat
ccagaggccatagccaacatgacagggtcaacattcttcgccatcatcttcttcgtgatg
atgatcacgcttgggctcgacagcacgtttggaggactggaggctatcattactgctgtg
atggatgaataccctggttacctggcgaacagacgggagctgtttgtactgggcttggtt
gttgtgtgctttttgggctccctcagcacccttaccaatggcggggcctatgtggtgaaa
ctgctggaggagtttggggtgggttcctccatcattgcagttggttttcttgaggccatc
gctgtttcctggttctatggtatcacaagattcagcaatgacattaaatccatgttaggc
tattctcctggattattctggaaggtgtgctgggtggccatcagtcctgcatttctagcg
tatataatagtgagctccctgcttaagccaccccccctccaactctttgactacaagtac
ccagactggagcatcacggtgggctacgtcatcggggcctcctccttcatgtggatccct
atctatatggtctacaagctggtgtggacccccggatcactgaaacagcgcctagccgtg
tgtctgagacctgagaggaccatcatgccagagatccacgcagactccctcaacatgagt
cctgttccatag
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