Oncorhynchus tshawytscha (Chinook salmon): 112266069
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Entry
112266069 CDS
T05605
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112266069
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112266069
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
112266069
NCBI-ProteinID:
XP_042151898
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Position
LG13:54797676..54825962
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AA seq
644 aa
AA seq
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MEMTQSMVMDRENEGGEKEKGEESSQENGRLTLADGGVAEKGDPKVNSGGGSGGVSNGYP
TSTAQSPKEGAGGVPTGAPRTLVVQQTSLDRPRETWSKKMDFLLSVIGYAVDLGNVWRFP
YICYQNGGGAFLLPYMLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGVGFAIC
IIALYIAFYYNTIMAWALYYLLASFRPTLPWTTCSNPWNTVNCLRYLSTDSNVTWTNTST
SPAEEFYTRQVLQVHLSPGLHQLGSVSWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTA
TFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWGKLLSTTVWIDAAAQIFFSLGPGFGVLL
AFASYNPFHNNCYKDALVTSSVNCLTSFLSGFVIFTVLGYMAEMRKIGVETVAKDAGPSL
LFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPQLLSKRRELF
VLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTSRFCADV
NMMLGFSPGLFWRVCWVAICPIFLLFIIVSFLAFPPEVKLFDYIYPPWTTVLGYCIGVSS
FICVPAYMVYHLLTAKGTFKQRLLNGITPVPSGPHSDIIITHAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagatgacgcagtcaatggtgatggacagagagaacgaagggggagagaaagagaaa
ggggaggagtcatcgcaggagaacggcaggctcacgctggctgacggaggggtggcagag
aagggggaccccaaagtgaactctggtggggggtcaggaggggtgtccaacgggtacccc
acgtccacagcgcagagcccaaaggagggagcgggaggtgtacccacaggggcccccagg
actctagtggtccagcagaccagtctggaccggccccgggagacctggagcaagaagatg
gactttctgttgtctgtgattggctacgccgtggacctgggaaatgtgtggcgcttcccc
tacatctgctatcaaaacggcggaggtgccttcctgctgccctacatgttgatggcggta
ttcggcggcgtgcctctgttttacatggagctggcactggggcagttccaccgcagcggc
tgcatctccatctggaaacacatctgccccatcttcaagggtgtgggcttcgccatctgc
atcatagcgctgtacattgcgttctactacaacaccatcatggcgtgggccctgtactac
ctgctggcgtcgttccggcccaccctgccctggaccacgtgctccaacccctggaacacg
gtcaactgtctccgctacctgtccaccgacagcaacgtcacctggaccaacacgtccacc
tcgccagccgaggagttctatacgcgtcaggtactgcaggtacacctgtctccaggtctg
caccagctcggcagtgtgagttggcagctggctctctgcctcctgttcatcttcaccatc
gtctacttcagcatctggaagggagtcaagacctctggcaaggtggtgtgggtgacagcc
accttcccctaccttgtcttgctggtgctgctcgttcgtggggcgactctgcccggggcc
tggaggggcgtggtcttctacctcaaacctgattgggggaaactactcagcaccacggta
tggattgatgctgcagctcagatcttcttctctctggggccaggttttggggtgctcctg
gcctttgccagctacaacccctttcacaacaactgctacaaggatgcgttggtgaccagc
tcggtgaactgcctgaccagtttcctctctgggtttgtcatctttactgtgctcggctac
atggctgagatgcgcaaaataggcgtggagaccgtagccaaggatgctggtcccagtctg
ctgttcatcatctatgctgaagccatcgccaacatgcccgctgccaccttcttcgccatc
atcttcttcctcatgatcatcatgctggggctggacagcacatttgccggtctggagggg
gtgatcacagccatgctggatgagttcccccaattgttgtctaagaggagggagttgttt
gtcctgggtctggtgtgtgtctgctacctgggagcgctctccaccctcacctacggaggt
gcgtttgtggtgaaactgtttgaggagtacgccacaggacctgctgtcatcactgtggtc
ttcctagaagtcatcgctgtttcctggttctacggcaccagtcgtttctgcgctgatgtc
aatatgatgctgggcttctcccctggactattctggagggtgtgctgggtagccatctgc
cccatcttcctactgttcatcattgtcagtttcctggcgttccccccggaggtcaagttg
tttgactacatctacccaccctggaccacagttctgggctactgcatcggagtgtcctcc
ttcatctgtgtaccagcctacatggtgtaccacctgctcactgccaaagggacctttaaa
cagcgtctcctgaatggcatcacccctgtacccagtgggcctcacagtgacattatcatc
acccacgccgtctga
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