Oncorhynchus tshawytscha (Chinook salmon): 112266827
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Entry
112266827 CDS
T05605
Symbol
slc6a4a
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112266827 (slc6a4a)
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112266827 (slc6a4a)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
112266827
NCBI-ProteinID:
XP_042153125
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Position
LG14:24121970..24150428
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AA seq
644 aa
AA seq
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MEMKQSMMMDRENEGGEKEKGEEQSQENGRLMLADGGVAEKGDPKVNSGGGSGGVSNGYP
TSTAPSPKEGAGGVPAGALRTLVVQQTSLDQPRETWSKKMDFLLSVIGYAVDLGNVWRFP
YICYQNGGGAFLLPYMLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAIC
IIALYIAFYYNTIMAWALYYLLASFRPTLPWTTCSNPWNTVNCLRYLSTDSNVTWTNTST
SPAEEFYTRQVLQVHLSPGLHQLGSVSWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTA
TFPYLVLLVLLVRGATLPGAWRGVVFYLKPDWGKLLSTTVWIDAAAQIFFSLGPGFGVLL
AFASYNPFHNNCYKDALLTSSVNCLTSFLSGFVIFTVLGYMAEMRKIGVETVAKDAGPSL
LFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPQLLSRRREWF
VLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTSRFCADV
HMMLGFSPGLFWRVCWVAICPIFLLFIIVSFLAFPPEVKLFDYVYPPWTTVLGYCIGVSS
FICVPAYMVYHLLTAKGTFKQRLLKGITPVPSGPHSDIIITHAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacagtcaatgatgatggacagagagaacgaaggaggggagaaagagaaa
ggggaggagcaatcgcaggagaacggcagactcatgctggctgacggaggggtggcagag
aagggggaccccaaagtgaactctggtggggggtcaggaggggtgtccaacgggtacccc
acgtccacagcaccgagccccaaggagggagcggggggtgtacccgcaggggccctgagg
actctggtggtccagcagaccagtctggaccagccccgggagacctggagcaagaagatg
gactttctgttgtctgtgattggctacgccgtggacctgggaaatgtgtggcgcttcccc
tacatctgctaccaaaacggcggaggtgccttcctgctgccctacatgttgatggcggta
ttcggtggcgtgcctctgttctacatggagctggcactggggcagttccaccgtagcggc
tgcatctccatctggaaacacatctgccccatcttcaagggtatcggcttcgccatctgc
atcatagcgctgtacattgcgttctactacaacaccatcatggcgtgggccctgtactac
ctgctggcgtcgttccggcccaccctgccctggaccacgtgctccaacccctggaacacg
gtcaactgtctccgctacctgtccaccgacagcaacgtcacctggaccaacacgtccacc
tcgcccgccgaggagttctatacgcgtcaggtactgcaggtacacctgtccccaggtctg
caccagctcggcagtgtgagttggcagctggctctctgcctcctgttcatcttcaccatc
gtctacttcagcatctggaagggagtcaagacctctggcaaggtggtgtgggtgacagcc
accttcccctaccttgtcctgctggtgctgctcgttcgtggggccactctgcccggagcc
tggaggggcgtggtcttctacctcaaacctgattgggggaaactactcagcaccacagta
tggattgatgctgcagctcagatcttcttctctctggggccaggtttcggggttctcctg
gcctttgccagctacaacccctttcacaacaactgttacaaggatgcgttgctgaccagc
tctgtgaactgcctgaccagtttcctctctgggtttgtcatctttaccgtgctcggctac
atggctgagatgcgcaaaataggtgtggagaccgtagccaaggatgctggtcccagtctg
ctgttcatcatctatgctgaagccatcgccaacatgcccgctgccaccttcttcgccatt
atcttcttcctcatgatcatcatgctggggctggacagcacgtttgccggtctggagggg
gtgatcacagccatgctggatgagttcccccagttgttgtctaggaggagggagtggttt
gtcctgggcctggtgtgtgtctgttacctgggagcgctctccaccctcacctacggaggt
gcgtttgtggtgaaactgtttgaggagtacgccacgggacctgctgtcatcactgtggtc
ttcctagaagtcatcgccgtttcctggttctacggcacgagtcgtttctgtgctgatgtc
catatgatgctgggcttctctcctggattgttctggagggtgtgctgggtggccatctgc
ccaatattcctactgttcatcattgtcagtttcctggcgttccccccggaggtcaagttg
tttgactacgtctacccaccttggacaacagttctgggctactgcatcggagtgtcctcc
ttcatctgtgtaccagcctacatggtgtaccacctgctcactgccaaagggacctttaaa
cagcgtctcctgaagggcatcacccctgtacccagtgggcctcacagtgacattatcatc
acccacgccgtctga
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