Opisthorchis viverrini (Southeast Asian liver fluke): T265_10881
Help
Entry
T265_10881 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03030
DNA replication
ovi03410
Base excision repair
ovi03420
Nucleotide excision repair
ovi03430
Mismatch repair
ovi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T265_10881
03410 Base excision repair
T265_10881
03420 Nucleotide excision repair
T265_10881
03430 Mismatch repair
T265_10881
03440 Homologous recombination
T265_10881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ovi03032
]
T265_10881
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_10881
Enzymes [BR:
ovi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T265_10881
DNA replication proteins [BR:
ovi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
T265_10881
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
T265_10881
MMR (mismatch excision repair)
DNA polymerase delta complex
T265_10881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
DNA_pol_B_exo2
divDNApol
Motif
Other DBs
NCBI-GeneID:
20325049
NCBI-ProteinID:
XP_009175643
UniProt:
A0A074ZBK1
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MATPKRPYAMVKQSSSSVKRGRGEDHPEPSKFEQELMLLDELEAEDVALVDESATLAVVD
ASPSSLWSRPIPPSMDPDRDSIIFQQFDVSHYKGDRLAGMPGAGESPVPIVRLFGITQKG
NSVCAHVHGFVPYFYVPAPKDFSVSHLGTFREALNTALLKDARTKEFDGLKHLVLMVDCE
QKQNIYGYHGKRKLPFLKVTVALPRIISAAKRILENGFAFGEYPFQSYPAFEANIDFEIR
FMVDTEITGCCWVEAPPGSYRLRDSSDVNDQKVWGNSSAQKSHSNVAPAQSRCQIEFDIA
WDALIAHQPDGEWSSIAPLRILSVDIECAGRKGIFPVPDQDPVIQIATMVCNYGESTPFI
RNVFTLDTCAPIVGSQVVCHKTEKELLEHWAMFVRQVDPDIITGYNTQNFDLPYLINRAN
HLKVDSFAFLGRVRGARSTVRDVMTQSKQMGRRENKFTNIEGRVQLDLLQILFRDYKLRS
YTLNAVSYHFLEEQKEDVEHNVISDLQNGDAHTRRRLAVYCLKDAYLPLRLLDKLMCVVN
NIEMARVTGVPLTYLITRGQQVKVISQLLRKAREHDFVLPTYQSQQGDEYVGATVLEPIK
GFYNEPIATLDFASLYPSIMMAYNLCYTTLMQVSSTPGGAAAGLNAFVERYNLSPDDYIC
TPTGAYFVKSSVHRGLLPEILEQLLSARKKAKVDLAKETDPLRKRVLDGRQLALKISANS
VYGFTGAQVGKLPCLEISASVTSFGRRMIDQTKEHVEGKFTRANGYAHNAAVIYGDTDSV
MCKFGVSTVAEAMELGRKAAEIISAEFPNPIRLEFEKVYFPYLLINKKRYAGLYFTKPDK
HDKMDCKGIETVRRDNSPLVANLIQACLERILIHRDPNSAITFAQGVISDLLCNRIDISQ
LVISKELTKTDEEYAGKQAHVELAAKMRKRDAGSAPHLGDRVPYVITAVGGKNSATYTKA
EDPLYVLEHNVPIDTKYYLENQLANPLLRIFEPILGEAKAKSVLLNGEHTRVKAVVHSKV
GQLSAFTQKRATCVGCRTLLPNDKAEAALCKYCEPRASEIYQKEIAQLNVMEGRFARLWT
ECQRCQGSIHEEVICTSRDCPIFYMRMKSRKDTEEQYKVVKRFGDPVW
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggccactcctaaaagaccgtacgcaatggtgaagcagagttccagttctgtgaagcga
ggcaggggcgaggaccacccggaaccatcgaaatttgagcaagaactaatgttgttggat
gagttggaggcagaggatgtggcattggtagatgagagtgcaacactggctgtcgtcgat
gcgtctcccagttctctttggtcaaggcctatcccgccatcaatggaccccgatcgtgat
agtattatctttcagcaattcgatgtgtctcattacaagggtgaccgactggcgggaatg
cccggtgcaggcgagagccctgttccgatcgtccgcttatttggtatcacacaaaaggga
aacagtgtatgcgcccatgttcacggatttgtcccctatttttacgtgcccgcacccaaa
gatttctccgtttcacacttgggcacttttcgggaagcattaaatactgctctactaaaa
gatgcgcgaacaaaggagttcgatggcctcaaacatctggtcctgatggtcgattgtgaa
caaaaacaaaatatatacggctatcatggcaagcgcaagctgccatttctcaaagtgaca
gtcgctctacctcgcatcataagcgctgccaaacgaatactggagaatggatttgctttc
ggagaatacccctttcagtcttatccagcttttgaggcaaatattgatttcgaaatccgt
tttatggtcgacaccgagatcaccggttgctgttgggtggaagctccacccggaagctat
cgtcttcgggattcatcagatgtcaacgatcagaaggtgtggggaaatagttcagcccaa
aaatctcactccaatgttgcaccagctcagtcccgatgtcagattgaatttgacatagct
tgggatgcacttatcgctcatcaacctgatggtgagtggagttcaatcgctcctctgcgg
atcctcagcgtggacattgagtgcgccggacggaaaggtatatttcctgtacctgatcaa
gatcccgtcattcaaatcgctacgatggtgtgcaactacggggagagtacgccgtttatt
cgaaatgtgttcacactagacacgtgcgctccgattgtgggttcgcaggttgtgtgccac
aaaacggaaaaggagttactcgagcattgggccatgttcgtgcgacaagttgatccagat
atcatcactggttataacacgcagaattttgacttaccatacttgatcaatcgagcaaat
catctgaaagtggacagcttcgctttcctcggccgtgttcgcggcgccagatccaccgtg
cgcgacgtgatgacacagtcgaaacaaatggggagacgagagaacaaattcaccaatatc
gaggggcgcgttcagctggatttgcttcagattttgttccgcgactataaacttcgcagt
tacacgttgaacgcagtcagttaccattttctggaggaacaaaaagaggatgtagagcac
aatgtaatttcagaccttcaaaacggggatgcccatacacgccgtcggctggctgtctac
tgcctaaaagatgcctacctgccattgcgactgttggacaaattgatgtgcgtggtgaat
aacattgaaatggcacgtgtgactggggttccgttgacctatttgatcacccgaggacaa
caggtcaaggtcatttcacagcttctacgcaaagctcgggagcatgactttgttttaccg
acgtaccagtcacaacagggtgacgaatacgttggggccactgtattggagcccatcaaa
ggattttacaacgaaccaattgccacgctcgacttcgctagtctgtatcccagtatcatg
atggcctacaatctgtgctatactacccttatgcaagtgagtagtacacccggcggagca
gcagctggattgaatgcttttgtcgaacgatacaacctttctccggacgactacatctgc
acaccaacgggggcatattttgtcaagtcttctgtccatcgtggcctgctgcctgagata
ttagaacagttgctcagcgctcgtaaaaaggcgaaggttgaccttgccaaggaaactgac
ccactacgtaagcgcgtgttggatggtcgtcagctggctttgaaaatcagtgcaaattct
gtctacggctttactggggctcaggttggtaaactcccctgcctggaaatttcagcctca
gttacctccttcggcagacgaatgatcgatcaaaccaaggaacatgttgaaggaaaattc
accagggctaatggttatgcccataacgctgctgtaatttacggtgacacagactctgtg
atgtgcaaatttggtgtctccaccgtagctgaagctatggaattgggtcgcaaagctgct
gaaatcatctctgcggaatttccaaatcctattaggctcgaattcgaaaaggtttatttc
ccgtacttgttgatcaacaagaagcgatatgctggtctctatttcaccaaaccagacaaa
cacgataagatggactgtaaaggaatcgaaacagttcgacgggacaatagtcctcttgtg
gccaatctgattcaagcgtgcttggagcgaatacttatccaccgtgatccgaattccgca
atcacctttgctcagggtgttatttccgatttgttgtgcaaccgaatcgacatctcccaa
ttggttataagcaaagaacttactaaaacagacgaagagtatgcgggtaagcaggcccac
gtagagttggcagcgaaaatgcgcaaacgggatgctggctccgcaccccatctgggcgat
cgtgtcccgtatgtgattactgcagttggaggtaaaaattcagccacctatacgaaggct
gaagatcccctatatgtcttggagcacaacgttcccatcgataccaaatactacctggaa
aaccagttggccaatcccctcttgcgtatttttgaacctattttgggagaagccaaagcc
aaatctgtgctgctaaatggtgagcatacgcgcgtgaaagcggtggttcactcgaaggtt
gggcagctgtctgcgttcacacagaagcgcgctacttgtgtaggttgccgcacattacta
ccaaatgacaaggctgaagctgccctctgtaaatactgcgagcctcgtgcttcggaaatc
taccaaaaggaaatagcacaactgaatgtgatggaaggtcgttttgcacgtttgtggacg
gaatgccagcgatgccaaggcagtattcatgaagaggtcatttgtaccagccgggattgc
cctatattctacatgcgtatgaagtcgcgaaaagacacagaagaacagtacaaggttgtc
aaacgattcggggaccctgtttggtaa
DBGET
integrated database retrieval system