Oxynema aestuarii: HCG48_08200
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Entry
HCG48_08200 CDS
T06528
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
oxy
Oxynema aestuarii
Brite
KEGG Orthology (KO) [BR:
oxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oxy03009
]
HCG48_08200 (rimO)
Enzymes [BR:
oxy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HCG48_08200 (rimO)
Ribosome biogenesis [BR:
oxy03009
]
Prokaryotic type
ribosomal protein modification factors
HCG48_08200 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QIZ70562
UniProt:
A0A6H1TVE3
LinkDB
All DBs
Position
complement(2038645..2040000)
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AA seq
451 aa
AA seq
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MGNKPTIAISHLGCEKNRIDTEHMLGLLVEAGYNVDTNEELADYVIVNTCSFIQAAREES
VRTLVGLAEEQKKIVITGCMAQHFQEQLLEELPEAVALVGTGDYHKIVQVIERAETGERV
KEVSAEPTYIADETTPRYRTTSEGVAYLRIAEGCNYRCAFCIIPHLRGNQRSRSIESIVA
EARQLAAQGVKEIILISQITTNYGTDIYGEPKLAELLRALGKVDIPWIRMHYAYPTGLTP
PVIKAIRETPNVLPYLDLPLQHSHPQVLRSMNRPWQAGVNDSIIERLKEALPEAVLRTTF
IVGFPGETDEQFDHLLQFVQRHEFDHVGVFTFSPEEGTPAYDLPNQISPEVMEARRDALM
QMQQPIALKRNRTQVGKVVDVLIEQENPATGQYIGRSARFSPDVDGLVYVRGKARLGSMI
PVLIENADIYDLSGRVARAADALQRESVVVS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaagccaaccattgctatttctcatctaggctgcgaaaaaaatcgcatcgac
accgagcatatgctcggcttattggtagaagcgggctataacgtcgatacaaatgaagaa
ctcgccgactatgtaattgtcaatacctgtagtttcatccaagcggcgcgcgaagaatcc
gtacgcaccttggtcggactggcagaagaacagaaaaaaatcgtgattacaggctgcatg
gcccagcacttccaagagcaactcttggaagaactgcccgaagccgtcgccctggtcgga
accggagactatcacaaaatcgtccaagtgatcgaacgggccgaaactggggaacgagtt
aaagaggtttccgccgagccgacctacattgccgacgaaaccacgccccggtatcgcacg
acgagcgaaggagtcgcctacctgcggattgccgaagggtgcaattatcgttgtgccttt
tgcattattccccacttgcgcggaaaccagcgatcgcgctcgatcgaatcgatcgttgcc
gaagcccggcagctcgccgctcaaggggtgaaagagattatcttaatttctcaaattacc
accaactacggcaccgatatttacggcgaaccaaaactggccgaattgctgcgggcatta
ggaaaagtagatattccctggattcggatgcactacgcttatccgaccgggttgacgcca
cccgttatcaaagccattcgcgaaacgccgaacgtgttgccgtatctggatttacccctg
caacattcccatcctcaagtgctgcgatcgatgaatcgtccttggcaagcgggggtaaat
gatagtattatagagcggctgaaagaagcgctgcccgaagcagtcctgcgaaccaccttt
attgttgggttccccggcgaaacggacgaacagttcgaccatctgcttcagtttgtgcag
cgtcatgagttcgatcatgtcggcgtgtttaccttttccccagaggaaggaacgcctgcg
tatgacctgcccaatcaaatttcgccagaggtcatggaagcccgccgggatgccttgatg
cagatgcagcagcccattgctttaaagagaaatcgaactcaagtcgggaaagttgtagac
gttctcatcgaacaggaaaatccagcaacaggtcagtatattggccgttcggctcggttt
tccccggatgtagatggtttggtctacgtgcgaggcaaagctcgactgggatcgatgatt
cccgtactgattgagaatgccgatatctacgatctgagcggtcgggttgcccgtgcagcc
gacgcgcttcagagagaatccgtggttgtttcttaa
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