Pyrococcus abyssi: PAB0139
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Entry
PAB0139 CDS
T00024
Symbol
lysS
Name
(GenBank) lysS lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
pab
Pyrococcus abyssi
Pathway
pab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PAB0139 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pab01007
]
PAB0139 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pab03016
]
PAB0139 (lysS)
Enzymes [BR:
pab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PAB0139 (lysS)
Amino acid related enzymes [BR:
pab01007
]
Aminoacyl-tRNA synthetase
Class I (A)
PAB0139 (lysS)
Transfer RNA biogenesis [BR:
pab03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PAB0139 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
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Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1e
Anticodon_2
tRNA-synt_1g
tRNA-synt_1b
Phage_connect_1
Motif
Other DBs
NCBI-ProteinID:
CAB49128
UniProt:
Q9V270
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All DBs
Position
212028..213608
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AA seq
526 aa
AA seq
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MVIVVHWADYVADKIIRERGEKDRYVVESGITPSGYVHVGNFRELFTAYIVGHALRDKGY
EVRHIHMWDDYDRFRKVPRNVPPEWKEYLGMPVSEVPDPWGCHDSYAEHFMEKFEREVKE
LGIEVEFLYASELYKRGEYSEEIRKAFEGKEKIMEILNKYREIAKQPPLPENWWPAMVYC
PEHRKEAEIIEWDGEWKVKYRCPEGHEGWVDIRSGNVKLRWRVDWPMRWAHFDVDFEPAG
KDHLAAGSSYDTGKEIIKAIYGKEAPMSLMYEFVGIKGEKGKMSGSKGNVILLSDLYEVL
EPGLVRFIYARHRPNKEIRIDLGMGLLNLYDEFDKVERIYFGVEDAKGDVEELKRTYELS
NPRIPNRLIAQAPFRFLAVLVQMPHLDEDGIISVLTNQGHVPKELEREDIERIRLRIRLA
KNWVEKYAPDSVKFSILPEPPKIEIDESVREAMEEVAKWIESKSTFSVDELNNVLFEVAK
KRGISSKEWFSTLYKLFIGKERGPRLASFLASLDKDFVVRRLRLEG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
gtggttatcgtggttcattgggccgattacgtggcggataaaataatcagggaaagggga
gagaaagataggtacgtcgttgagagcggaataacgccaagtggatacgttcatgttgga
aatttcagggagctattcacggcgtacatagttggccatgccctgagggataaggggtac
gaggtaagacacattcacatgtgggacgactacgacaggttcagaaaggttcccaggaac
gttcctccggagtggaaggagtacttgggaatgcctgtgagcgaagtcccagatccctgg
ggatgccacgatagctatgccgagcacttcatggagaagtttgagagggaagttaaagag
ctgggaatagaggtcgaattcctgtacgcgagtgaactctacaagaggggggagtactct
gaggagataaggaaggccttcgagggtaaggagaaaatcatggagatactgaacaagtac
agggagatagccaaacagcctcctctcccggaaaactggtggcccgcgatggtttattgt
ccagagcacaggaaggaagccgagataatagaatgggacggggaatggaaggtcaaatat
agatgcccagagggtcatgagggatgggttgacataaggagcggtaacgttaagcttaga
tggcgcgttgattggccaatgcgttgggctcactttgatgttgactttgagcctgctggt
aaggatcacttagcggcaggttcaagctacgatactggaaaggaaataataaaggcaatt
tacggaaaggaggctccaatgagccttatgtacgagttcgttgggataaagggagagaag
ggaaaaatgtccggaagcaaggggaatgtaattcttctcagcgacctttacgaggttctc
gagcccggcctcgtgaggttcatatacgcgaggcacaggccgaacaaggagataaggata
gacttgggcatggggttactgaacctttacgacgaatttgacaaggttgagaggatatac
tttggggttgaagatgctaagggggatgttgaagagcttaagagaacctatgaactttca
aaccccaggatacctaataggctaatagcccaggcaccctttagattcttggccgtccta
gttcagatgccccacttggatgaggatggaataataagcgttctgacaaatcaagggcac
gtccctaaggaactcgaaagggaagatatcgagaggataaggctaaggataagattggct
aagaattgggtcgaaaagtacgctccagatagcgtgaagttctcgattttgcccgagcct
ccgaagattgaaatcgatgaaagcgttagagaagctatggaggaagttgccaagtggata
gagagcaaatccaccttcagcgtcgacgagcttaacaacgttctgttcgaggtagcaaag
aagaggggcatttcaagcaaggagtggttctcaacgctttacaagctattcatcggtaag
gaaagggggcctagattggccagtttcttggcatccctagacaaagacttcgttgtaagg
aggctcaggctagagggataa
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