Pyrococcus abyssi: PAB2389
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Entry
PAB2389 CDS
T00024
Name
(GenBank) idsA-like multifunctional short chain isoprenyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pab
Pyrococcus abyssi
Pathway
pab00900
Terpenoid backbone biosynthesis
pab01100
Metabolic pathways
pab01110
Biosynthesis of secondary metabolites
Module
pab_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PAB2389
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pab01006
]
PAB2389
Enzymes [BR:
pab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PAB2389
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PAB2389
2.5.1.29 geranylgeranyl diphosphate synthase
PAB2389
Prenyltransferases [BR:
pab01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PAB2389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
V-SNARE_C
Motif
Other DBs
NCBI-ProteinID:
CAB49828
UniProt:
Q9V077
LinkDB
All DBs
Position
complement(879474..880514)
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AA seq
346 aa
AA seq
DB search
MKMGVGKYDELFNRIKERAKLVDEKLFELIPEKEPKVLYEAARHYPLAGGKRIRPFVVLT
ATEAVGGNALKAIYPAVAIELIHNYSLVHDDIMDMDETRRGKPTVHKVWGINMAILAGDL
LFSKAFEAISRAEISPEKKAKVLETIVKASNELCEGQALDLEFENREMVSIEEYMRMISG
KTGALFDASAKVGGIVGTENEEYIEALSRWGRNVGMAFQIWDDVLDLIADEEKLGKPVGS
DIRKGKKTLIVAHFFENADEKAKEKFLKVFGKYAGDVKGKGIIEEDVKAEVMEAIELLKE
HGSIDYASRIARELVEKANEALNVLPESRARKDLELLASFMVEREY
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgggggttggaaagtacgatgagctatttaataggataaaggagagggctaaa
ctagtcgatgaaaagttattcgagttaattcccgagaaagagcccaaggttctttacgaa
gcagccagacattacccgcttgcaggtggtaagaggattaggcccttcgtggttttgacg
gcaacagaagccgttggtggaaatgcattgaaggctatttatccggcagttgccatcgag
ttgatccataactattccctagtccacgacgacataatggacatggacgagactaggagg
ggaaagccgaccgtgcacaaggtttggggaataaacatggcgatcttagccggcgactta
ttattcagcaaggccttcgaggctatatctagggctgaaatttcacctgaaaagaaagct
aaagttcttgaaacgatagtcaaggcgtcaaatgagctctgcgaggggcaggccttggac
ttagaattcgagaacagggaaatggttagcatagaggaatacatgaggatgataagcgga
aaaactggagctctctttgatgcctcagctaaagtagggggaatagttggaaccgaaaac
gaggaatacatagaggccctgtcgaggtggggaaggaacgttggaatggcgttccagata
tgggatgacgtcctagacttgatagccgacgaggagaagcttggaaaaccagtgggtagc
gacattaggaagggcaagaagactttgatagttgctcacttcttcgagaacgcggatgag
aaagcgaaggagaagttcttaaaggtctttggaaagtacgctggggacgttaaggggaag
ggaataatagaggaggacgtaaaggcggaggtaatggaggccatagagctactcaaggag
catgggagcatagattatgcgagtagaatagcaagggaactagttgagaaggcaaatgag
gctttaaacgttctacccgagagcagggcgagaaaggatttagagttgcttgcgagtttc
atggttgagagggagtactga
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