Pyrococcus abyssi: PAB2410
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Entry
PAB2410 CDS
T00024
Symbol
rpoD
Name
(GenBank) rpoD DNA-directed RNA polymerase, subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
pab
Pyrococcus abyssi
Pathway
pab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAB2410 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pab03021
]
PAB2410 (rpoD)
Enzymes [BR:
pab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAB2410 (rpoD)
Transcription machinery [BR:
pab03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PAB2410 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
CAB49452
UniProt:
Q9V198
LinkDB
All DBs
Position
505506..506285
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AA seq
259 aa
AA seq
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MVEIKILKKTDDSITFILEGVDVAFANALRRTILGEVPTFAVDEVEFYENDSALFDEIIA
HRLAMIPLKTPVDRFELDALELDDYTVTLSLEAEGPGIVYSGDLKSDDPDVKPANPDIPI
VKLAKGQRLVFNAFAKLGRGKDHAKWQPGFTYYKYFTRIHISKEIEGWEKLKKLAKKRGL
PVKENENEVIVETIKPFYIPKEFEEYEGKGIWEEIVPNTYVFVVETNGELPVEEIVKIAL
KILMRKADRFINELQGLAG
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagattaagattcttaaaaaaaccgatgattcaataactttcatccttgaaggt
gttgatgtagcttttgctaacgccctaaggagaactatacttggagaagttccaacgttt
gcagtcgatgaagttgagttttatgagaacgattctgcccttttcgatgagataatagct
cacaggttggcaatgattccactgaagaccccagttgataggttcgagctcgatgccctc
gagctcgatgattacactgtaaccctatcattagaggccgaaggcccaggaatagtttac
tctggcgatttaaagagtgatgacccagatgtaaagccagcaaatcctgatataccaata
gttaaacttgcgaagggtcagagattggtatttaatgcatttgcaaagctaggaaggggc
aaggaccatgcaaagtggcagcctggatttacctattacaagtactttacgaggatccac
ataagcaaggaaatcgagggttgggaaaagttaaagaagctcgccaagaagaggggtctc
ccagttaaggagaatgaaaatgaggttatagtcgaaaccataaagccattctacatccct
aaggaattcgaagagtacgaaggaaagggtatatgggaagaaatagtgcccaatacctac
gtctttgtagttgaaacgaatggagaactccccgttgaggagatagttaagatagccctt
aagatattaatgaggaaggccgatagatttataaatgagctccaaggattagctggttga
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