Pyrodictium abyssi: PABY_01680
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Entry
PABY_01680 CDS
T09712
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
pabi
Pyrodictium abyssi
Pathway
pabi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PABY_01680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pabi03021
]
PABY_01680
Enzymes [BR:
pabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PABY_01680
Transcription machinery [BR:
pabi03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PABY_01680
BRITE hierarchy
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
BES80601
LinkDB
All DBs
Position
complement(162300..165731)
Genome browser
AA seq
1143 aa
AA seq
DB search
MILAQATFPTVEDRWLVMKAFIDEFGLVKQHIDSYNRFVEKELKEIVKEFGVIATPRREY
EVRIVDVELGEPMVMESDGSEHPVTPMECRIRDLTYAAPIKAKVVIVENGIEREPEDIIL
GFLPVMLRSKADPLAKCFYEGGPREECERILIEAGEDPRDPGGYFIINGSERVVVIQEDQ
ALNRILVGKARAGTGSAVYTAKVISSHAGVRYQLILDMHKDGTLHVSMSRALSKIPFIIL
MRALGLESDRDIVLAISPDPQIQQMLIPSLEQARAINTVEDALDFIGSRFREGIGKPREQ
RIRVAERVLDYILLPHIGTKPEARLQKALFLGQMAAKLLEYVLGRRGEDDKDHYANKRVL
LAGDLIAMVFRIAMRALAYDVRQQLEKLRARGRHVSVRMVIRSDIITNRLREALATGNWP
GQRTGVSQILDRTNWLSMLSHLRRVVSQLSRSQPHFEARDVHGTQWGRICPFETPEGPNC
GLVKNLSLMSYVSPGVSEEEVEKILYDMGVRDAVEIFNEVRKVGYYPPELQQWSKVFLNG
KLIGYHPDGETLAQEIRRLRRSGKIPPDVNVSVYKTEHINEVYINTDQGRILRPVFVVEN
GKLVYSPEHAEKLRRGEWRFTDLLRHGIVELLDADEEENSYIALNPEDLTPEHTHMEIWP
AAIVGVTASTIPYAEHNQSPRNTYQAAMAKQALGLYAANYQIRVDTRAHLLHYPEKPLVQ
TRTLDVIGFNDRPAGQNMIVAVMSFTGYNIEDAIIMNKSSIERGLARSTFFRLYVTEERR
YAGGLSDKVEKPEANVEGSKPPEMYRKLDADGIISPEVEVTGGEVLIGKTSPPRFMEEYR
EFGTVSVRRRDTSVTMRHGEKGFVDTVILTENIEGFKLIKVRVRDQRIPELGDKFASRHG
QKGVIGMLIPQYDMPFTEDGISPDLIINPHAFPSRMTLGQLFEAIAGKYAAVYGRLVDGT
PFAKEPVENLKIELLKAGYAPDGTELMYDGRTGELLRNPILIGVVYYQKLHHMVADKMHA
RARGPVQVLTRQPTEGRAREGGLRFGEMERDCLIGHGAAMLLRERMLESSDRYVMYVCEK
CGHIAWFDRNKRKYICPVHGDRGKISAVTVPYAFKLLLQEMMSMCVMPRLRLAPKHEWRP
QGE
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
ttgatactggctcaggcaacattccccacggtagaggatagatggcttgtaatgaaggcg
tttatcgacgagtttgggcttgtcaagcagcacatagactcgtataacaggttcgtcgag
aaagagctcaaggagatagtgaaggagtttggagtaatagcgacacctagacgagagtac
gaggtacgcatagtagacgtagagctaggcgagccaatggttatggagagcgatgggagc
gagcacccggtaacgcccatggagtgtcggatccgcgacctaacgtacgcagcgccgata
aaagccaaggttgtgatagtcgagaacggtatagagcgtgaaccggaggacataatcctc
ggtttcctcccggtaatgctacgctccaaggccgacccgctagcaaagtgcttctacgag
ggcggcccaagagaggagtgtgagcgtatactaatagaggcgggagaggacccccgcgac
cccggaggctactttataatcaacggctctgagcgtgtggtagtcatccaggaggatcaa
gctctcaacaggatactcgtgggtaaggccagggctggtactggtagcgcagtgtacacg
gccaaggtcatatcctcgcatgctggcgtacgctaccagctcatcctcgacatgcacaag
gacggtacactacacgtctcaatgagtcgcgccctcagcaagatacctttcataattctc
atgcgcgccctaggcctcgagagcgaccgtgacatagtcctggcaataagccctgacccc
cagatacagcagatgctcataccctccctagagcaagcacgtgcaataaacactgtagag
gatgcactagacttcataggtagcaggttccgcgagggtatcggtaagccgcgcgagcag
cgtatacgtgtagctgagagagtcctcgactacatactgttaccccacataggcacaaag
ccggaagcccgtctacagaaggcgctcttcctcggccagatggccgcaaagctactcgag
tacgtgcttggacgccgcggcgaggacgacaaggaccactatgccaacaagcgtgtccta
ctcgcaggcgacctcatagctatggtgttccgtatagctatgagggctctagcttacgat
gtaagacagcagctagagaagctacgtgcacgcggcaggcatgtaagcgtccgcatggtt
atacgctctgacataataaccaaccgcctccgcgaggcactcgcgacgggtaactggcct
ggccagcgcaccggcgtaagccagatactagaccgtacaaactggctatcaatgttgagc
catctccgccgtgtagtctcgcagctgagccgtagccagccgcacttcgaggcccgtgac
gtccatggcacgcagtggggcaggatatgtccattcgagacccccgaaggccccaactgt
ggtctcgtcaagaatctctcgctgatgtcctacgtgtctcccggtgtaagtgaggaggaa
gtagagaaaatcctctacgatatgggtgtacgcgacgcagtagagatattcaatgaggta
cgcaaggtaggatactacccgccagagctgcaacagtggagcaaagtgttcctcaacggt
aagctcatcggctaccacccagacggcgagacactagcccaggagatacgcaggctaaga
cgtagcggcaagatacctcccgacgttaacgtctccgtatacaagaccgagcacatcaac
gaggtatatataaacacagatcagggccgcatactacgcccagtcttcgtagtcgaaaac
ggcaagctagtatacagcccagagcacgccgagaagctacgcagaggcgagtggaggttc
acagacctcctacgccacggcatagtagagctactggatgccgatgaggaagagaacagt
tacatagcactcaacccagaggacctaacgccagagcacacccacatggagatatggcct
gcagcaatagtgggcgtaacagcgagcaccataccctatgccgagcacaaccagtcgcca
cgtaacacctaccaagcggcaatggccaagcaggcactaggcctctacgccgccaactac
cagatacgtgtagacacccgcgcacacttgctacactatcccgagaagccgctagtgcag
acacgtacactagacgtgataggcttcaacgaccgcccggccgggcagaacatgatagta
gcagtaatgtcgttcaccggctacaacatcgaggacgctataatcatgaacaagtcgtca
atagagcgcggcctggcacgctcaaccttcttccgcctctacgttacggaagagcgccgc
tatgctggaggcctcagcgacaaggtagagaagcccgaagccaacgtagagggctctaag
ccgccggagatgtaccgtaagctcgacgcagacggcatcataagcccagaggtagaggtg
actggcggtgaggtgctgataggcaagactagcccgccgagattcatggaggagtaccgc
gagttcggcacagtatccgtcaggcgccgcgacacatccgtgacaatgaggcatggcgag
aagggcttcgtggacacagtgatactcacagagaacatagagggcttcaaactcatcaag
gtgcgtgtccgtgaccagcgtataccagagctgggcgacaagttcgcgtcgcgccacggc
cagaagggcgtaataggtatgctaatcccgcagtacgacatgccattcaccgaggacggt
atatcgccggacctcataatcaacccgcacgcattcccatcgcgaatgaccctgggccag
ctcttcgaggctatagcgggcaagtacgcggcagtatatgggcgactggtcgatggtaca
cccttcgctaaggagccggtcgagaacctcaagatagagctactgaaggctggttacgcg
cccgacggtaccgagctcatgtatgacggccgtaccggagagctgctccgcaacccgata
ctcatcggtgtagtgtactaccagaagctacaccacatggtagcagacaagatgcatgca
cgcgccaggggcccagtccaggtgctgacaaggcagcccaccgagggccgtgcgcgcgag
ggcggtctaaggttcggtgagatggagcgcgactgtctcataggccatggcgcggctatg
ctgctacgcgagcgtatgctagagagcagcgaccgctacgtgatgtacgtctgcgagaag
tgtggccacatagcgtggttcgaccgcaacaagaggaagtatatatgcccggtgcacggc
gaccgcggcaagatctcggccgtcacggtgccctacgccttcaagctcctcctccaggag
atgatgagcatgtgtgtaatgcccaggctccgcctcgcgcctaagcacgagtggaggccc
cagggtgagtaa
DBGET
integrated database retrieval system
