Salipiger abyssi: Ga0080574_TMP4374
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Entry
Ga0080574_TMP4374 CDS
T04681
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
paby
Salipiger abyssi
Pathway
paby00240
Pyrimidine metabolism
paby01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Ga0080574_TMP4374
Enzymes [BR:
paby01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
Ga0080574_TMP4374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
APZ54708
UniProt:
A0A1P8UZA0
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All DBs
Position
3784801..3785718
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AA seq
305 aa
AA seq
DB search
MSLFTLSAPVADALANGTPVVALESTIITHGMPWPQNLEMARRVEDTVRAEGAVPATIAV
LDGRLCVGLDDAQLEALAQARNVAKLSRADLAVCMAEGGTGATTVAATMIAAARAGIATF
ATGGIGGVHRGAESNFDISADLQELAQTPVTVVCAGAKAILDLPKTLEVLETLGVPVIAY
GQDQLPAFWSRDAGLRAPLRMDTPGQIARAQAMRVALDLPGGQLVANPIPAEAEIPREVL
APVVARATADAESHGIRGKQLTPYLLQRIFELTEGRSLDANIALVLNNARLGARIATEMS
ALPGN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcttcaccctctccgccccggtcgccgatgcgctggccaacggcacgcccgtc
gtggcgctggaatcgaccatcatcacccatggcatgccctggccgcagaatctcgaaatg
gcgcgccgggtcgaggacacggtgcgcgccgagggcgccgtgccggcgaccatcgcggtg
ctcgacggcaggctctgcgtcgggctcgacgatgcgcagctcgaagcgctggcgcaggcg
cgcaacgtcgccaagctcagccgcgccgatctggcggtctgcatggccgagggcggcacc
ggcgccaccaccgtggccgccacgatgatcgccgccgcccgcgccggcatcgccaccttt
gccaccggcggcatcggcggcgtgcatcgcggcgccgagagcaatttcgacatctccgcc
gaccttcaggaactggcgcagacgccggtcaccgtggtctgcgccggcgccaaagcgatc
ctcgatctgccaaagacgctggaagtgctggaaacgctcggcgtgccggtcatcgcctat
gggcaggaccagttgccggccttctggtcgcgcgacgcgggccttcgcgcaccgctgcgc
atggacacgcccggccagatcgcccgcgcccaggcgatgcgcgtggcgctggatctgccc
ggcggccagctcgtcgccaacccgatcccggcagaggccgagatcccccgcgaggttctg
gcgccggtggtggcgcgcgcgacggcggatgcagagagccacggcatccgcggcaagcag
ctcacgccctatctgttgcagcggatcttcgagttgaccgagggccggtcgctcgacgcc
aatatcgcgctggtgctgaacaatgcgcggctcggggcccggatcgcgacggaaatgagc
gccctgcccggcaattga
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