Pectobacterium actinidiae: M9782_10840
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Entry
M9782_10840 CDS
T08879
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pacb
Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pacb03009
]
M9782_10840 (rimO)
Enzymes [BR:
pacb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
M9782_10840 (rimO)
Ribosome biogenesis [BR:
pacb03009
]
Prokaryotic type
ribosomal protein modification factors
M9782_10840 (rimO)
BRITE hierarchy
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WEF09746
LinkDB
All DBs
Position
complement(2526824..2528152)
Genome browser
AA seq
442 aa
AA seq
DB search
MSNVSTPQPRIGFVSLGCPKNLVDSERILTELRTEGYQVVPRYDDAELVIVNTCGFIDSA
VQESLEAIGEALNENGKVIVTGCLGAKENQIREVHPKVLEITGPHSYEQVLSHVHQYVPK
PTHNPFTSLVPEQGVKLTPRHYAYLKISEGCDHRCTFCIIPSMRGDLDSRPIGSVLDEAK
RLVDAGVKELLVISQDTSAYGTDVKQRMGFWNGQPVKTSMVSLCEQLASLGVWVRLHYVY
PYPHVDDVIPLMAEGKILPYLDIPLQHASPKILKLMKRPGAVERTLERIKRWREICPDLT
LRSTFIVGFPGETEEDFQMLLDFLKEAKLDRVGCFKFSPVEGAAANALPDQVPEEVKEAR
FHRFMQLQQTISTQRLQDKIGREVLVLIDEIDEEGAIGRSMADAPEIDGAVYLNGETGVK
VGDIVKVKVEHADEYDLWGSRI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtttctaccccgcaaccacgtatcggctttgtttccctcggttgcccgaaa
aacctcgtcgactccgagaggattctgaccgaactgcgtactgaaggttatcaggtcgtc
ccacgttatgacgacgctgaactggtgatcgtcaatacctgtggttttattgacagcgcc
gtacaagagtcgctggaagccattggcgaagcgctgaatgaaaacggtaaagtcatcgta
acgggctgtttgggtgcgaaagaaaaccaaatacgcgaagtgcatcccaaggttctggaa
attaccggcccgcacagctacgagcaggtgctgtcacacgtccatcaatatgtccctaaa
ccgacacacaacccgtttaccagtctagtgcccgagcaaggtgtgaaactcacaccgcgt
cattacgcctatctgaaaatttcagaaggctgtgaccatcgttgtacgttctgcatcatc
ccttccatgcgtggcgatttagatagccgtccaattggttcggtgctggatgaagcgaaa
cgtctggttgatgccggagtaaaagagctgctggtgatttctcaggatacctcagcgtac
ggtacagatgtgaagcagcgtatggggttctggaacggtcaaccagtcaaaaccagcatg
gtcagcctgtgtgagcaactggcgtcgttgggcgtgtgggtgcgcttgcattatgtctac
ccttatccacacgtagacgatgtgattccgttaatggcggaaggcaaaatcctgccttat
ctggacattccactccagcacgccagcccgaaaattctcaagctgatgaagcgccctggc
gcggtagaaagaacgctggagcgcattaagcgctggcgcgaaatttgcccagacctaacg
ctgcgctctacctttattgtcggtttccctggcgaaacggaagaagacttccagatgctg
ctcgatttcctgaaagaagccaaactggatcgcgtgggctgctttaaattcagcccggtc
gaaggcgcagcggcaaatgcattgccagatcaagtaccggaagaggttaaagaagcgcgt
ttccaccgcttcatgcagcttcagcagacaatttccactcagcgcttgcaggataaaatt
ggccgtgaagtgctggtgctaatcgatgaaatcgacgaagaaggcgcgattggccgtagc
atggcagacgcacctgaaattgatggcgcggtttacctgaatggcgagaccggcgtgaaa
gtcggtgacatcgtcaaggtgaaggtcgaacacgcagacgagtacgatctgtggggtagc
cgaatttaa
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