Pigmentiphaga aceris: FXN63_10340
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Entry
FXN63_10340 CDS
T06198
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pacr
Pigmentiphaga aceris
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pacr03009
]
FXN63_10340 (rimO)
Enzymes [BR:
pacr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FXN63_10340 (rimO)
Ribosome biogenesis [BR:
pacr03009
]
Prokaryotic type
ribosomal protein modification factors
FXN63_10340 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Homeobox_KN
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QEI06190
UniProt:
A0A5C0AZB0
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All DBs
Position
2405254..2406642
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AA seq
462 aa
AA seq
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MSSVVAPPSQPYLSAPKVGFVSLGCPKALTDSEQILTQLRAEGYETSPSYEGADLVIVNT
CGFIDDAVRESLDAIGEALNKNGKVIVTGCLGAKAGPTGGNLIEHVHPSVLAVTGPHATT
EVMQAVHEHLPKPHDPFIDLVPDHGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVS
RPIHDVVREAENLAKAGVKELLVISQDTSAYGVDVKYRTGFVNGRAVRTRMTDMVRELAT
LGMWVRLHYVYPYPSVDEVIPLMNETHASGGRVLPYLDVPFQHANQRILKLMKRPASSER
NLDRIRAWREACPELTIRSTFIAGFPGETEEEFQELLDFLVEAQLDRVGCFAYSPVEGAT
ANELPDPVPEDIRNERVARFMAVQESISRKRLAKKVGKVVKCLVDEVNADGGIARSMADA
PEIDGSVFISPAEKPWKRYKVGDIVSVRITGSDSHDLWGDVA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagttgtcgccccgccgtcccagccgtacttgtcagcacccaaagtgggattt
gtctcacttggatgcccaaaagcactcacggattcggaacaaatcctgacccagctgcgt
gcagaagggtacgaaacctcgcccagctacgagggtgcagacctcgtcatcgtgaatacc
tgtgggttcattgacgacgccgtgcgcgaaagcctggacgccatcggcgaggcgctgaac
aagaacggcaaggtcatcgtcacaggctgtctgggggccaaggctggcccaaccggcggc
aacctgatcgaacacgtgcaccccagcgtgctggctgtaaccggccctcacgccacgacc
gaagtcatgcaggcggtgcacgaacacctgcccaagccgcacgacccgttcatcgacctg
gtgccggaccacggtattcgcctgacgcccaagcattacgcctatctgaagatctcggaa
ggctgtaatcaccgctgcaccttctgcatcatcccgtcgatgcgcggtgacctggtgtcg
cgccccatccatgacgtggtgcgcgaagccgaaaacctggccaaggccggtgtgaaagaa
ctgttggtgatctcgcaagacaccagcgcctatggcgtggacgtcaaataccgcaccggt
tttgtgaacggccgtgccgtgcgtacgcgcatgaccgacatggtccgcgaactggcgacg
ctgggcatgtgggtgcgcctgcactatgtctacccgtatcccagcgtggacgaagtcatt
ccgctgatgaacgaaacccatgccagcggcggccgtgtcttgccgtatctggacgtgccg
ttccagcacgcgaaccaacgcattctgaagctgatgaagcgtccggcttccagcgaacgc
aatctggatcgcatccgcgcttggcgcgaggcctgtccggaactcaccatccgcagcacc
ttcatcgctggcttcccgggcgaaaccgaagaagaattccaggaactgctggacttcctg
gtggaagcccagctcgaccgcgtgggctgttttgcctactcgccggtggaaggtgctacc
gccaatgaattgcccgatccggtgccggaagacatccgcaacgaacgcgttgcgcgtttc
atggcggttcaggaaagcatctcgcgcaagcgtctggccaagaaggttggcaaggtcgtg
aagtgcctggtggacgaagtcaacgccgacggcggcattgcgcgctcgatggctgatgca
ccggaaatcgacggcagcgtcttcatctcgccggctgaaaagccctggaagcgctacaag
gtgggcgacatcgtgtcggtgcgcatcaccggctcggactcgcatgatttgtggggcgac
gtggcctga
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