Pygoscelis adeliae (Adelie penguin): 103925176
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Entry
103925176 CDS
T06012
Symbol
VCAM1
Name
(RefSeq) LOW QUALITY PROTEIN: vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103925176 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
padl04090
]
103925176 (VCAM1)
04091 Lectins [BR:
padl04091
]
103925176 (VCAM1)
CD molecules [BR:
padl04090
]
Proteins
103925176 (VCAM1)
Lectins [BR:
padl04091
]
I-type lectins (Siglecs)
103925176 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C2-set
ICAM_N
Receptor_2B4
Ig_6
Ig_4
Ig_C17orf99
ICAM1_3_5_D2
C1-set
V-set_CD47
Syndecan
Motif
Other DBs
NCBI-GeneID:
103925176
NCBI-ProteinID:
XP_009332131
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MRRNGKINLENTAEFMYVLPIVVKGFEMEIIPASRIVAQIGETLILTCNTTGCASPSFSW
RTQMDNPLGGTVNNHRTYSTLTMNPVSIVNSHDYLCTVFCGEKEKKEKSVKVDLYSFPSD
PIIEISPSLVAGEPVTVICKIPDVYPSDHLEVLLKKEEHVLHKENFYEDDSTNTETKTVT
YSFNPTAEDIGKEITCVAKLPIANMDFEPKERVTSQKLNANFGPQNTIITASPGNLPMEG
DSLKLTCVTESNPPPQIVWRKHLADESIQHLIENNVLSIPHARFTDSGQYICEVINLVTN
KTEKATVDIVIQGAPNIAELSIEPSTTVQEGENVSIQCSAESNPPPKIILRRKSDSADMG
PYSEGRILLLPSVTFLNGGDYECVAENTFGKSKNEITLNVEYGPKNTMISVIPATAVKEG
ETVMMKCTSSGNPAPVISWKKKNATGQSEKIFKDATLTIQNIKSQDLGLYECEAYNQFGK
EEKAVKLLVQAAPKNTLSVFPSSAVIQGESVTVSCDGITTLERVDGKYTIGRAQLKDAGT
YECVSXNELGEKSRHIVLYAKVPPQNITVLVYPSENVKEGENVTIICSTYSNPPSQMVLK
KLHQEKEIILPSVNGTFVLYNVTKNDTGRYLLDVFNEVGNNIKVIEIAVVGRLEKPDQMI
PLIIAFSCVTAVAVPVVAILIYVSRKAKINGSYSLVKALRLKV
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaatgggaaaataaatcttgagaatactgctgagtttatgtatgttctccct
attgtagttaaaggttttgaaatggagattatacctgctagcagaattgttgcacagatt
ggagaaacgctcatactcacatgcaatactactggctgtgcatcaccaagtttttcctgg
agaacccagatggacaaccccctcggaggaacagtgaacaaccataggacatactctacc
ttgactatgaatccagttagcattgtgaattctcatgattatctgtgtactgtcttctgt
ggtgagaaagagaaaaaggagaagagtgtcaaagttgacctttactctttccccagtgat
cctatcatcgagatcagcccatccttagttgctggagaaccagtcactgtcatctgtaaa
attcctgatgtgtatccttctgatcacctggaagtactcctaaagaaagaggaacatgtt
cttcataaggaaaatttttatgaagatgacagcacaaatacagagaccaaaactgtgaca
tattcatttaatcccacggctgaagatattgggaaggagattacctgtgtggccaagtta
ccaattgctaatatggactttgaacccaaagaaagagtaacttctcagaaactgaatgca
aactttggtccacaaaatactatcattactgcatctccaggcaacttgccaatggaagga
gactctctaaaactcacctgtgtgactgagagtaatccaccaccacaaatagtttggaga
aaacatctggctgatgaaagcattcagcatctgatagaaaacaatgtcctttctattccc
catgcccggttcactgattcaggacagtacatctgtgaagtaattaatctggtaactaat
aaaacagagaaagcaactgtggacattgttatacaaggtgctccaaacattgcagaactc
tccattgagccttctacaacagttcaagaaggagaaaatgtttccatacaatgttctgct
gagagtaaccctcctcccaagattattttaaggagaaaatctgacagtgcagacatgggg
ccttacagtgaggggagaattctccttcttccatctgtgacgttcctaaatggaggagac
tatgaatgtgtagctgaaaatacgtttgggaaaagtaaaaacgaaataacacttaatgtg
gaatatggaccgaagaatacaatgatctctgttatccctgctactgctgttaaagaagga
gaaactgtgatgatgaaatgtactagttctggtaatccggctccagtgatctcttggaag
aaaaagaatgccaccgggcagtctgagaaaatttttaaagatgcaactttaactatacag
aacataaaaagtcaagatctagggctttatgaatgtgaagcttataaccaatttggcaaa
gaagaaaaagctgtgaaattacttgttcaagctgcaccaaaaaatacactttcagttttc
ccttcaagtgcagtgatacaaggagaaagtgttactgtctcttgtgatgggatcacaacc
cttgaaagagtagatggcaaatataccataggcagggctcagctaaaggacgcgggaaca
tatgaatgcgtgtcanttaatgaactgggagagaagtctcggcacatagtactttatgcc
aaagttcctccccaaaatattactgtgttagtatatccatcagaaaatgttaaagaagga
gaaaatgtcactattatatgtagcacatacagtaacccaccatcacagatggtcctgaaa
aaactccatcaggaaaaagaaattattctgccatcagtgaatggaacctttgtactctac
aatgtcaccaaaaatgacacaggcagatatttgcttgatgttttcaatgaggttggaaac
aacatcaaagtgattgagatagctgttgtaggaagattggaaaaaccagatcaaatgata
ccactgattattgcattctcctgtgtaacagcagtagcagtacctgtagttgcaattttg
atctacgtgtcaagaaaagcaaagataaatggatcctacagtcttgtaaaagcactccgg
ctgaaagtgtga
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