Pseudomonas aeruginosa PAO1: PA3337
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Entry
PA3337 CDS
T00035
Symbol
rfaD
Name
(RefSeq) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pae
Pseudomonas aeruginosa PAO1
Pathway
pae00540
Lipopolysaccharide biosynthesis
pae01100
Metabolic pathways
pae01250
Biosynthesis of nucleotide sugars
Module
pae_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PA3337 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pae01005
]
PA3337 (rfaD)
Enzymes [BR:
pae01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
PA3337 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pae01005
]
Core region
PA3337 (rfaD)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
DUF1707
DapB_N
Ldh_1_N
Motif
Other DBs
NCBI-GeneID:
882502
NCBI-ProteinID:
NP_252027
UniProt:
Q9HYQ8
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All DBs
Position
complement(3746078..3747076)
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AA seq
332 aa
AA seq
DB search
MPMSIIVTGAAGFIGSNLLQALNRRGETDIIAVDDLTDGEQFRNLADADIADYLDQNDFL
ERYARGDFGTVRALFHQGACASTLESNGRYMMENNYRYSCRLLESSLELGVPFLYASSAA
VYGSGRTFREARQYERPLNVYGYSKFLFDQRVRRALPQARSQVVGLRYFNVYGPREEHKG
RMASVAYHCYQQLRRDGRVELFGEHGGFPPGGHLRDFVAVEDVARVNLHFFDHPQRSGIF
NLGSGQARTFNEVALAVINSVRANADQPPLSLQQAVESGLLGYREFPESLRARYQSHTCA
DLELLREAGYRDDFQSLEEGVAGYCRWLARSA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatgagcatcatcgtcaccggcgccgccggcttcatcggcagcaatctgctgcag
gcgctgaaccggcgcggcgagaccgacatcatcgcggtggacgatctcaccgacggcgag
cagttccgcaacctggcggacgccgatatcgccgactacctggaccagaacgacttcctc
gagcgttacgcccgcggcgacttcggcacggtccgcgcgctgttccaccagggcgcctgc
gccagcaccctggaaagcaatggccgctacatgatggagaacaactaccgctacagttgc
cgcctgctggaaagcagcctggaactcggcgtgccgttcctctacgcctcgtcggcggcg
gtctacggctccggccggaccttccgcgaggcgcgccagtacgagcggccgctgaacgtc
tacggctattccaagttcctcttcgaccagcgtgtgcggcgggcgctgccgcaggcgcgc
agccaggtggtcggcctgcgttacttcaacgtctacgggccgcgcgaggaacacaagggg
cggatggcctcggtggcctaccactgctaccagcaattgcgccgcgacgggcgggtcgaa
ctgttcggcgaacacggcggcttcccgcccggcggccacctgcgcgacttcgtcgcggtg
gaggacgtggcgcgggtaaacctgcatttcttcgaccatccgcagcgttcgggaatcttc
aacctcggcagcggccaggcacggaccttcaacgaggtcgccctggcggtgatcaatagc
gtccgcgccaacgccgaccagccgcccctgtcgctgcaacaggccgtggaaagcggcctg
ctcggctaccgcgagttccccgagtcgctgcgggcgcgctaccagagccatacctgcgcc
gacctggagctgctgcgcgaggcgggctaccgcgacgatttccagagcctggaagagggc
gtcgccggctactgccgctggctggcgcgcagcgcctga
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