Pseudomonas aeruginosa PA1R: PA1R_gp2267
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Entry
PA1R_gp2267 CDS
T02929
Name
(GenBank) GGDEF domain/EAL domain protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
paer
Pseudomonas aeruginosa PA1R
Pathway
paer02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PA1R_gp2267
Enzymes [BR:
paer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PA1R_gp2267
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
AHA24010
LinkDB
All DBs
Position
2540975..2543038
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AA seq
687 aa
AA seq
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MKLDSRHSLSLKLLRVVLLAALAVGVVLSCAQIVFDAYKAKQAVSSDAQRILAMVRDPST
QAVYSLDREMAMQVLEGLFQHEAVRQASIGHPGEPMLAEKSRPLLDLPTRWLTDPILGQE
RTFSIRLIGRPPYSEYYGDLKITLDTAPYGENFVTTSEIIFISGILRALAMGLVLFLVYH
WMLTKPLSKIIEHLVSINPDRPSQHQLPLLKGHERNELGLWVTTANQLLASIESNSHLRR
EAEDNLLRISQYDFLTGLPNRQLLQQQLDQILDGAGRQQRRVAVLCLGLDDFKGINEQYT
YQLGDQLLIALADRLRGHSARLGSLARLGGDQFALVQADIEQPYEAAELAQSILDGLEAP
FEIDQHEVRLRATIGITLFPEDGETTEKLLQKAEQTMTLAKTRSRNRYQFYIASVDSEMR
RRRELEKDLRDALQRHELHLVYQPQVDYRDHRVVGVEALLRWQHPLHGFVPPDLFIPLAE
QNGSIFSIGEWVLDQACRQLREWHDQGFDDLRMAVNLSTVQLHHNALPRVVSNLLQVYRL
PARSLELEVTETGLMEDISTAAQHLLSLRRAGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLQDEDDATIVRAIIQLGKSLGMQVIAEGVETAEQEAYIIAEGCNEGQGYLYS
KPLPARELTQYLKQARRLSQATSSERP
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactggactcccgacacagcctctcgctcaagctgctgcgtgtcgtgctactggcg
gcgctggccgttggcgtagtgctcagttgcgcgcagatcgtcttcgacgcctacaaggcc
aagcaggcggtgagcagcgacgcccaacgcatcctcgcgatggtccgcgacccttccacc
caggcggtctacagcctcgaccgggaaatggcgatgcaggtcctcgaaggcctgttccag
cacgaggcggtgcgccaggcgagcatcggccatcccggcgagccgatgctggcggagaaa
tccaggccgctgctggacctgccgacgcgctggctgaccgacccgatcctcggccaggaa
cgcaccttcagcattcgactgatcggccgcccgccctatagcgaatactacggcgacctg
aagatcaccctggacaccgcgccctacggcgagaacttcgtcaccacttcggaaatcatc
ttcatctccggcattctccgcgccctggccatgggcctggtgctgttcctggtctaccac
tggatgctgaccaagccgctgtcgaagatcatcgagcacctggtcagcatcaatcccgac
cgccccagccagcaccagttgccgctgctcaaggggcacgaacgcaacgagctggggctc
tgggtgaccaccgccaaccagttgctcgcctcgatcgaaagcaacagccacctgcgccgc
gaggccgaagacaacctgctgcgcatttcccagtacgacttcctcaccggcctgccgaac
cgccagttgctgcaacagcaactcgaccagatcctcgacggcgccggccgccagcagcgc
cgggtggcagtgctgtgcctgggcctcgacgatttcaaggggatcaacgagcagtacacc
taccagctcggcgaccagttgctgatcgccctcgccgaccgcctgcgcgggcacagcgcg
cggctcggttcgctggcgcgcctgggcggcgaccagttcgccctggtccaggccgacatc
gagcaaccctacgaggcggccgaactggcgcagagcatcctcgacggcctggaagcgccg
ttcgagatcgaccagcacgaggtgcgcctgcgcgccaccatcggtatcaccctgttcccc
gaggacggcgagaccacggagaaactgctgcagaaggccgagcagaccatgaccctggcc
aagacccgctcgcgcaaccgctaccagttctacatcgccagcgtggacagcgagatgcgt
cgccgccgggaactggaaaaggacctgcgcgacgccctgcagcgccacgagctgcacctc
gtctaccagccgcaggtggactaccgcgaccaccgcgtggtcggcgtcgaggcgctgctg
cgctggcaacatccgttgcacggcttcgtcccgccggacctgttcatcccgctggcggaa
cagaacggcagcatcttcagcatcggcgagtgggtgctcgaccaggcctgccggcagttg
cgcgaatggcacgaccagggcttcgacgacctgcgcatggcggtcaatctttccaccgtg
cagctccaccacaacgccctgccacgggtggtcagcaacctgctgcaggtctaccgcctg
ccggcgcgcagcctggagctggaagtcaccgagaccggcctgatggaggacatctccact
gccgcccagcacctcctcagcctgcgccgcgccggcgcgctgatcgccatcgacgatttc
ggcaccggctattcctcgctgagctacctgaagagcctgccgctggacaagatcaagatc
gacaagagtttcgtccaggacctgctgcaggacgaggacgacgcgaccatcgttcgcgcc
atcatccagctcggcaagagcctgggcatgcaggtgatcgccgagggcgtggaaaccgcc
gagcaggaggcgtacatcatcgccgaaggttgcaacgaaggtcagggctacctgtacagc
aagccgctgccggccagggaactgacccagtacctcaagcaggcgcgacgcctgagccag
gccaccagcagcgaacgaccctga
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