Pasteurella aerogenes: NCTC13378_02018
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Entry
NCTC13378_02018 CDS
T05989
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
paet
Pasteurella aerogenes
Pathway
paet00540
Lipopolysaccharide biosynthesis
paet01100
Metabolic pathways
paet01250
Biosynthesis of nucleotide sugars
Module
paet_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC13378_02018 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
paet01005
]
NCTC13378_02018 (rfaD)
Enzymes [BR:
paet01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NCTC13378_02018 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
paet01005
]
Core region
NCTC13378_02018 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
VEG72755
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Position
1:complement(2107603..2108529)
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AA seq
308 aa
AA seq
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MIIVTGGAGMIGANIVKALNDMGRKDILVVDNLKDGTKFVNLVDLDIADYCDKEDFLASI
IAGDDLGDIDVIFHEGACSATTEWDGKYLMHNNYEYSKELLHYCLEREIPFLYASSAATY
GDKTEFVEERQFEGPLNAYGYSKFLFDQYVREILPEANSPVCGFKYFNVYGPREQHKGSM
ASVAFHLNTQINRGENPKLFAGSEHFLRDFIYVGDVAAVNIWAWKNGVSGIFNLGTGKAQ
SFKEVADAVVKFHGKGQIETIPFPEHLKARYQEYTQANLSKLRAAGCDYQFKDVATGVAE
YMAWLNHK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaacaggcggcgcgggaatgattggcgcgaatatcgtgaaagcattaaac
gatatggggcgtaaagatattttagtggtggacaacctgaaagatggcactaaatttgtg
aatttagtggatttggatattgcggattattgcgacaaagaagactttttggcgtcaatt
attgccggcgatgatttgggcgatattgatgtaattttccacgagggtgcctgttcggcg
accacggaatgggatggtaaatatttaatgcacaacaactacgaatattctaaagagttg
ttgcattattgcttagagcgcgaaattccattcctctacgcctccagtgcggcgacttat
ggcgataaaacggaattcgtggaagaacgtcaatttgaaggtccattaaacgcttacggt
tactcaaaattcttatttgaccaatatgtgcgcgaaattttaccggaagccaattcgcct
gtttgtggctttaaatatttcaatgtttacggtccgcgtgaacaacataaaggctcaatg
gcaagtgtagcatttcatttaaatacccaaattaacagaggtgaaaatccaaaactattt
gccggcagcgagcatttcttgcgcgactttatttacgtaggcgatgtggcagcggtgaat
atttgggcatggaaaaatggcgtatcgggcattttcaatttaggtaccggtaaagcacaa
agttttaaagaagtggcggatgcagtggtgaaattccatgggaaaggacaaattgaaacc
attccattcccagaacatttaaaagctcgttatcaagaatacactcaagcgaatttaagc
aaacttcgcgcggcaggttgcgattatcaatttaaagatgtagcaacaggcgtggcggaa
tatatggcgtggcttaatcataaataa
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