Paracoccus aestuarii: JHW48_02530
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Entry
JHW48_02530 CDS
T08926
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paex
Paracoccus aestuarii
Pathway
paex03030
DNA replication
paex03410
Base excision repair
paex03420
Nucleotide excision repair
paex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHW48_02530 (polA)
03410 Base excision repair
JHW48_02530 (polA)
03420 Nucleotide excision repair
JHW48_02530 (polA)
03440 Homologous recombination
JHW48_02530 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paex03032
]
JHW48_02530 (polA)
03400 DNA repair and recombination proteins [BR:
paex03400
]
JHW48_02530 (polA)
Enzymes [BR:
paex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHW48_02530 (polA)
DNA replication proteins [BR:
paex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JHW48_02530 (polA)
DNA repair and recombination proteins [BR:
paex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JHW48_02530 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JHW48_02530 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
WCR00611
LinkDB
All DBs
Position
500403..503201
Genome browser
AA seq
932 aa
AA seq
DB search
MGERFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVAGFCNMLWRYVQTDDGHT
APTHAAVIFDHSSKTFRNEIYPAYKAQRPEPPEDLRPQFPLTRDATRAFNIACIETEGYE
ADDIIAAMAVAARNAGGTATIISSDKDLMQLIGDGVDMLDPIKNKLIGPDEVFEKFGVGP
DRVVDVQALAGDAVDNVPGAPGIGIKTAALLIQEYGDLETLLERAEEIKQPKRRQTLIEH
AEQIRISKRLVQLDCDTPLDVTLESLEVKAPDADRLLAFLSEMEFRTLTNRVAESLGAEA
PAVQAAPASEAPAAPDQPAIDVAGYETVTTPDALDTWIAAIRDAGQVAIDTETTGLDEMQ
ADLVGISLATAPGRACYIPLGHVAGGDDLFGQSARVDGQLDPATVLAALKPVLEDMSILK
IGQNLKYDWKMLARHGIRVTPVADTMLMSYALNAGTHNHGMDELAERYLGHKCIPIKDLI
GSGKSQINFAQVAIDKAAPYAAEDADITLRLYQHFAPMLPVEGVSTVYHTLERPMIPVLA
QMEMAGIRIDTDVLKRMSNAFAQKMAGLEDEIHGLAGQSFNIGSPKQLGEILFDKMGLSG
GKQGKTGAFSTSADVLEDLAAEGHDLPARVLDWRQISKLKSTYTDALPTYVNAETGRVHT
SYSITGAQTGRLSSTEPNLQNIPIRTEEGRRIRQAFIAPEGYRLVALDYSQIELRILAHV
ADIPALKQAFREGIDIHAMTASQMFGVPVEGMDPMIRRQAKAINFGVIYGISGFGLSRNL
RIPRAEAQSFIDTYFERFPEIRAYMDKTVADAKQDGYVTTLFGRRINTPGINQSGPAAGG
ARRAAINAPIQGAAADIIRRAMIRMPDAIADLPARMLLQVHDELVFEVEEGAADALIDRA
RDVMEGAAEPSVRLSVPLVVDAGQGATWAEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcgtttcggcaagggctgtcatctgcatctgatcgacggatcggccttcatc
tttcgcgcctatcacgcgctgccgcccctgacgcgcaaatcggacgggttgccggtgggt
gcggtcgcggggttctgcaacatgctgtggcgctatgtgcagaccgatgacgggcatacc
gcgccgacccatgcggcggtgatctttgaccattcgtccaagaccttccgcaacgaaatt
tatcccgcctacaaggcgcagcgccccgagccgcccgaggatctgcgcccgcaattcccg
ctgacccgcgacgcgacccgcgccttcaacatcgcctgcatcgagaccgagggctatgag
gccgacgacatcatcgcggccatggccgttgccgcccgcaacgccgggggcacggccacg
atcatcagcagcgacaaggacctgatgcagctgatcggcgacggcgtcgacatgctggat
cccatcaagaacaagctgatcggccccgacgaggtcttcgagaagttcggcgtcggaccc
gaccgcgtggtcgacgtgcaggcgctggccggtgacgcggtcgacaacgtgccgggcgcg
ccgggcatcggcatcaagaccgcggccctgctgatccaggaatacggtgatctggagacg
ctgctggagcgcgccgaggagatcaagcagcccaaacggcgccagaccctgatcgagcat
gccgagcagatccgcatcagcaagcgcttggtgcagctggattgcgacacgccgctggac
gtgacgctggagtcgcttgaggtgaaggcgcctgatgccgaccgcctgctggcattcctg
tccgagatggagttccgcacgctgaccaatcgggtcgcggagagcctgggcgccgaggcc
ccggccgtgcaggccgcgcccgccagcgaggcccccgccgcgccggaccagcccgccatc
gacgtggcgggctatgagacggtgaccacccctgatgcgctggacacctggatcgcggca
atccgcgacgcggggcaggtcgccatcgacaccgagaccacgggcctggacgagatgcag
gccgatctggtgggcatcagcctggccacagcgccggggcgggcgtgctatatccccctg
ggccatgtggcggggggcgacgatctgttcgggcaatccgcgcgggttgacggccagttg
gaccccgcgaccgtgctggccgcgctgaagccggtgctggaggacatgtcgatcctgaag
atcggccagaacctgaaatacgactggaagatgctggcccgccacggcatccgggtgacc
ccggtcgccgatacgatgctgatgtcctatgcgctgaacgcgggcacccacaatcacggc
atggacgagctggccgaacgctatctgggccataaatgcattcccatcaaggatctgatc
gggtccggcaagagccagatcaacttcgcccaggtcgccatcgacaaggccgccccctat
gcggccgaggatgcggatatcacgctgcgcctctatcagcatttcgcgccgatgctgccg
gtggagggggtctcgaccgtctatcacacgctggaacgcccgatgatcccggtgctggcg
cagatggagatggcgggcatccgcatcgacacggacgtgctgaaacgcatgtcgaacgcc
ttcgcccagaagatggccgggctggaggatgagatccacgggctggcggggcagagcttc
aacataggcagccccaagcagctgggcgagatcctgttcgacaagatgggactgagcggc
ggcaagcagggcaagaccggggcgttttccaccagcgccgacgtgctggaggatctggcc
gccgagggccacgacctgcccgcgcgggtgctggactggcgccagatcagcaagctgaaa
tcgacctataccgacgcgctgcccacctatgtgaatgccgagacggggcgcgtccatacc
agctattcgatcaccggggcgcaaacggggcggctgtcatccaccgagccgaacctgcag
aacatccccatccggaccgaggaggggcgccgcatccgccaggccttcatcgcgccggag
ggctaccggctggtcgcgctggactacagccagatcgagctgcggatcctcgcgcatgtg
gccgacatcccggcgctgaagcaggccttccgcgaggggatcgacattcatgccatgacc
gccagccagatgttcggcgtccccgtcgaggggatggaccccatgatccggcgtcaggcc
aaggcgatcaatttcggggtgatctacggcatctcggggttcggcctgtcccggaacctg
cgcatcccgcgggccgaggcgcagagcttcatcgacacctatttcgagcgtttccccgag
atccgcgcctatatggacaagacggtcgcggatgcgaagcaggacgggtatgtgacgacc
ctgttcgggcggcgcatcaatacgccgggcatcaaccaatccggccccgcggcgggcggc
gcgcggcgcgcggccatcaacgcgccaatccagggggctgcggccgacatcattcgccgc
gcgatgatccgcatgccggatgccatcgccgatctgcctgcgcggatgctgctgcaggtc
catgacgaactggtcttcgaggtcgaggagggcgccgccgacgccctgatcgaccgcgcc
cgcgacgtgatggagggggcggccgaaccctcggtccgcctgtccgtgccgctggtcgtc
gatgcggggcagggggcgacctgggccgaggcgcattga
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