Pantoea agglomerans C410P1: BEE12_10005
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Entry
BEE12_10005 CDS
T04739
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
pagc
Pantoea agglomerans C410P1
Pathway
pagc00220
Arginine biosynthesis
pagc00791
Atrazine degradation
pagc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
BEE12_10005
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
BEE12_10005
Enzymes [BR:
pagc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
BEE12_10005
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_5
HlyD_D23
RnfC_N
HlyD_3
NQRA
ATP-grasp
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
AOE40147
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All DBs
Position
complement(2213073..2216690)
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AA seq
1205 aa
AA seq
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MFTTVLIANRGEIACRAIRTLKRLGVKSVAVYSDADRNAQHVKQADIAIALGGDKASDSY
LRIDKILAAAQQSGAQAIWPGYGFLSESQPFAEACEAAGIAFVGPTAQQIGEFGLKHRAR
ELAASAGVPMTPGTPLLASLEEAMQAADKIGYPVMLKSTAGGGGIGLTRCADAGALASAW
ESVRRLGEQFFSDAGVFLERCIDRARHVEVQIFGDGNGTVVALGERDCSLQRRNQKVVEE
TPAPGLSPATRDALLASAVRLGERVNYRSAGTVEYIYDVDQQAFYFLEVNTRLQVEHPVT
ECVTGLDLVECMLQVAAGDAVDWSRLQQAPQGAAIEVRLYAEDPLKNFQPSPGLLTGVTF
PDGVRVDSGIETGSEVSSFYDPMIAKLIVHADTRDAALEKLHHALDATQLHGIATNLDYL
RQITASDAFRSGNVWTRYLDSVVPASSVVEVLQPGTFSSVQDYPGRLGYWDIGVPPSGPM
DDFAFRLANRIVGNHDAAAGLEFTLQGPTLRFHCDAIVALTGADCDATLEGEPVSYWQPL
AVKAGQTLALGRARTGCRSYLAVRNGFDVPEYLGSRSTFSLGQFGGHAGRTLRVADMLAI
SQPERAACTTPAPVSDPQPLDAALIPHYGSEWRIGVLYGPHGAPDFFTQAAIDAFFASDW
QVHYNSNRLGVRLVGPKPTWTRANGGEAGLHPSNVHDCEYAIGAVNFTGDFPVILTHDGP
SLGGFVCPVTIAKAELWKVGQVKPGDTIRFHPITADDALAREKAQMHLIETLRPEHPPTF
AVPSLAETAHGSATILAALEATASTPKVVYRQAGDKYVLIEYGDNVLDLALRLRVHLLMN
ALTAQAEPGVEELSPGVRSLQVRYDSRIIHQSGLMSLLLALEATLGDVSTLKVPSRVVWM
PMAFEDSATLGAVSRYQETVCASAPWLPNNVDFIQRINGLSSRDEVRDTLFNASYLVLGL
GDVYLGAPCAVPIDPRHRLLSSKYSPARTFTAEGTVGIGGMYMCIYGMDSPGGYQLVGRT
LPIWNTFLKNPQFATDAPWLLRFFDQVRFYPVSETELTQLREDFREGRASLRIEETQFDF
AAHQQFLADHAAEIAAFRQRQAAAFEQEVQLWAQEEQNASPEDETRASVSEEEENGLAVQ
ADLNGNIWKVLVQPGDEVSAGQTLIIVEAMKMELAIVAPQAGRVTRIACQAGRPVSPGDN
LLWLE
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccaccgtactgattgccaaccgcggcgaaattgcctgtcgcgccattcggacg
ctgaagcgcctgggcgtcaaaagtgtcgcagtctattcagatgctgaccgcaacgcgcag
cacgttaagcaggcggatatcgctatcgcgctgggcggcgataaggccagcgacagctat
ctgcgcatcgacaaaattctggcggcggctcagcagagcggcgcgcaggctatctggccg
ggctacggttttctttcagaaagccagccgtttgccgaagcctgtgaagcggcgggcatc
gcctttgtcggccccaccgcgcagcagattggtgagttcggccttaaacaccgtgcccgt
gagctggcagccagtgcgggtgtaccgatgacgccaggcacaccgctgcttgcgtcgctg
gaggaggcgatgcaggcggccgataagatcggctatccggtgatgctgaaaagcacggcg
ggcggcggcggcattggcctgacgcgctgcgccgacgccggagcgctcgccagcgcctgg
gagagcgtacgccgtcttggcgagcaattcttcagtgatgcgggcgtgtttctggagcgc
tgcatcgatcgcgcccgccacgtagaagtgcagatttttggtgacggtaacggcactgtg
gtcgcactgggtgaacgcgactgctcactgcagcgccgcaatcaaaaggtggtggaagag
acgcccgcgcccggtctgtctccggcgacgcgtgacgccctgctcgcctcggcggtgcgg
ctcggcgagcgggtcaactaccgcagcgcaggcaccgtggagtatatctacgacgttgac
cagcaggcattttactttctggaagtgaacacccgcctgcaggtggagcatccggtcact
gagtgcgtcaccggactcgatctggtggagtgcatgttgcaggtggcggcgggcgatgcg
gttgactggtcacgcctgcagcaggcgccgcagggcgcagccattgaagtgcggctctat
gcggaagatccactgaagaactttcagcccagccccggcctgctaaccggcgtaactttc
cctgacggcgtgcgggtcgacagcggcatcgaaaccggcagcgaggtctccagcttctac
gatccgatgatcgccaaactgatcgtgcatgccgacacccgcgatgctgctctggaaaaa
cttcaccatgcgctggatgccactcagctgcacggtatcgccaccaacctcgactatctg
cgccagattaccgccagcgacgcgtttcgcagcggcaacgtctggacgcgttaccttgac
agcgtggtgcctgcctcctccgtggtggaagtgttgcaacccggtaccttcagttcggtt
caggactatcctggccgcctcggctactgggatatcggcgtgccaccttccggcccgatg
gatgacttcgctttccggctggctaaccgcatcgtcggtaatcatgacgcggcggcgggg
ctggaatttaccctgcaggggccgacgctgcgtttccattgtgatgccatcgtggcgctg
accggtgctgactgcgatgccacgctggagggcgaaccggtcagctactggcagccgctg
gcggtgaaagcgggacagactctggcgctgggacgcgcccggacgggctgccgcagctat
ctggcagtgcgtaacggattcgacgtgccggagtatcttggcagccgcagcaccttttcg
ctgggccagtttggcggtcacgccggacgcaccctgcgggttgccgatatgctggcgatc
tcccagcctgagcgggcagcctgcaccacgcctgccccggtcagcgatccgcagccgctc
gatgcggcgctgattccgcactacggcagcgagtggcgcatcggcgtgctttacggcccg
cacggcgcaccggatttcttcacccaggccgccatcgatgcgttttttgccagtgactgg
caggtgcactacaactccaaccgcctcggcgtgcggctggtcggcccgaaaccgacctgg
acccgcgccaacggcggcgaagcgggcctgcatccctccaacgttcacgactgtgaatat
gccattggcgcggtcaatttcaccggcgacttcccggtgatcctgacgcacgacggccca
agcctcggcggctttgtctgtccggtgactatcgccaaagccgagctgtggaaagtgggc
caggttaaacctggcgacaccatccgcttccaccccatcaccgcagacgatgcgctggcg
cgggaaaaagcgcagatgcatctgattgagacattgcggcctgagcatccgcccacgttt
gccgtgccgtcactggccgaaactgcccacggctccgccacgattctggccgctctggag
gccaccgccagcacgccgaaagtggtctatcgccaggcgggcgacaaatatgtgctgatt
gagtatggcgacaacgtactggatctggcgctgcgtctgcgtgtccatctgctgatgaat
gcgctgacggcgcaggcggagcctggcgtagaagagctgtcgcctggcgtgcgttcgctg
caggtgcgctacgacagccgcatcattcaccagtccgggctgatgtcgctgctgctggcg
ctggaagcgacgctgggcgacgtcagcacgctgaaagtgccctcccgcgtggtgtggatg
ccgatggcatttgaagacagcgccacgctgggtgccgtcagccgctatcaggagacggtg
tgtgccagcgccccctggctgcctaacaacgtggactttatccagcggattaatggctta
agcagccgcgatgaggtgcgcgacaccctgttcaacgccagctatctggtgctggggctg
ggcgacgtctaccttggcgcaccctgtgctgttccgatcgatccacgccatcgcctgctg
agttccaaatacagtccggcgcgcaccttcaccgccgaaggcaccgtagggatcggcggc
atgtacatgtgcatctacggcatggattcgcccggcggctatcagctggtgggccgcacg
ctgcccatctggaataccttcctgaaaaacccgcagttcgctaccgatgcgccgtggctg
ctgcgcttcttcgatcaggtgcgcttctatccggtgagtgaaaccgaactgacccagctg
cgcgaagatttccgcgaaggccgcgccagcctgcgtattgaagagacgcagtttgatttt
gccgcccaccagcagttccttgccgaccacgccgctgaaattgcagcgttccgccagcgc
caggccgccgcctttgaacaggaagtgcagctatgggcgcaggaggagcagaacgcgtcg
ccggaggatgaaacgcgcgccagcgtcagcgaagaggaggagaacgggctggcggtgcag
gcggatctcaatggcaacatctggaaagtgctggtgcagccgggcgacgaggtcagcgcc
gggcagacgctgattatcgtagaggcgatgaagatggagctggcgatagtcgccccgcag
gccggtcgtgtgacgcggattgcctgccaggcgggccgtccggtcagtcctggcgataac
ctgctgtggctggaataa
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