Pantoea vagans FDAARGOS_160: AL522_04980
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Entry
AL522_04980 CDS
T04302
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AL522_04980
Enzymes [BR:
pagg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AL522_04980
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
Motif
Other DBs
NCBI-ProteinID:
AMG57042
LinkDB
All DBs
Position
324414..326420
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMATVSLVAVITISIFIVIQLFHFVQQRRIDYAQQMENIAHTVRQPLSEA
VLRADISQAERILHSLKPAGILSRADVVLPNAFQALHADFETEKPVPLLVARLFELPVQI
TLPLYSVENTGMPKPLAYLVLQANSTRVYQFILSTLSTMIITYLLLALILSVAISWCINR
LVVHPLRNLSRELQELPPQSILTHKLTLPQRHRDDEIGMLIRSYNRNQQVLESIHDEMSR
LTTHFAVTDLPNRTLFLALVEQFMCNPEQPLGLMVIRIETLQEANGVLSDEQRDTLMLTL
VEKIRHTLDDHTLLAQTGVSDFVLLMKRASNPFRALRLARNLMIRLNQPVNLHQLQLRPN
VSIGLALRDDRPLSANELLDRATSAMMSARHQGKNQILFFDAALTERAQKRLTQEHDILQ
GLHDEQFALYLQPQVDMRTGTLTGAEALLRMRQPDGSYGLTEEFIASAEEIGVISAIGRW
VFEEACRILAGWQRQGIMLPLSVNISAVQLRDTGVVSHLQSLLARHRIAPGTLVLEVTET
AQLDDAEQAISMLRLLQQTGVAVALDDFGMGYSNLNYLHQLKALPVNKLKMDRSFVAALP
HDDTMVRIVAAIAEIIHLEVIAEGVETAEQRDWLLARGIAIGQGYLYAEALPVSRFNQTW
IENSSLPQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtaagccggtcacttacgataaagcagatggcgacagtttcgctggttgcggtt
atcaccatcagtatctttatcgtcatccaactgtttcattttgtgcagcagcgcaggatt
gactatgcccagcagatggagaatatcgcacacaccgtccgccagccgctgtcggaagcg
gtgctgcgtgccgatatttctcaggccgaacgcattcttcattcactgaagccagccggt
attttatcgcgcgccgatgtggtgctgccgaatgcgttccaggccctgcacgccgacttc
gagacggaaaaaccggtgccgcttctggtggcccgcctgtttgagctgccggtgcagatt
accctgccgctctattcggtggaaaataccgggatgccgaagccgctggcctatctggtg
ttgcaggctaactcgacgcgcgtctaccagtttatcctcagcacgctctcgaccatgatc
atcacctacctgctactggcgctgatcctctctgtggcgatcagctggtgcatcaaccgg
ctggtggtgcatccgctgcgcaatctctcacgggaattgcaggagctgccaccgcagtcg
attctgacgcataaactgaccctgccgcagcgccaccgcgatgacgaaatcggcatgctg
atccgcagctacaaccgcaatcagcaggtgctggagtcgattcatgacgagatgagtcgg
ctgactacccattttgccgtcaccgatctgcctaaccgtacgctgtttctggcgctggtc
gagcagtttatgtgcaaccctgaacagccactgggtctgatggtgatccgcattgaaacg
ctgcaggaagctaacggcgtactgagcgatgagcagcgcgatacgctgatgctgacgctg
gtggagaagatccggcatacgctggatgaccataccctgctggcacagaccggtgtcagc
gacttcgtgctgttaatgaagcgcgccagtaatccgttccgtgcgctgcgcctggcgcgc
aacctgatgattcgcctgaatcagccggtcaacctgcatcagctgcagctgcgtcctaac
gtcagtatcggtctggcgctgcgcgacgatcggccgctgagcgcgaatgagctgcttgat
cgcgcgacctcggcgatgatgtcggcccgtcatcagggcaaaaatcagatcctgttcttt
gacgccgcgctgaccgagcgtgcccagaagcgtctgacgcaggagcatgacattctgcag
gggctgcacgatgagcagttcgccctttacctgcaacctcaggtggatatgcgcaccggc
acgttaaccggcgcagaagcgctgctgcgtatgcgccagccagatggcagttacggtctg
accgaagagtttattgccagtgccgaagagattggcgtgattagcgcgattggccgctgg
gtgtttgaagaggcgtgccgcattctggctggctggcagcgacagggcattatgctgccg
ctgagtgtgaatatttccgcggttcaactgcgggataccggcgtagtttctcatctgcaa
tctttgctggcgcgccaccgcatcgcacctggtaccctggtgctggaagtgacagagacg
gctcagcttgacgatgcggaacaggcgatatcgatgctgcgactgttgcagcagaccggc
gtggcggtggcgctggatgatttcggcatgggctattccaacctgaactatctccatcag
ctcaaagcgttgccggttaacaaactgaagatggatcgcagctttgtggcggcactgccg
catgacgacaccatggtccgcatcgtggcggccatcgccgagattattcatcttgaggtg
attgccgaaggcgtggaaacggcagagcagcgcgactggctgctggcgcgcggtatcgct
atcggtcagggctatctctatgcggaagcgctgccggtgagccgattcaaccagacgtgg
atcgaaaactcctcactgccgcaataa
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