Pantoea vagans FDAARGOS_160: AL522_09145
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Entry
AL522_09145 CDS
T04302
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg00730
Thiamine metabolism
pagg01100
Metabolic pathways
pagg01240
Biosynthesis of cofactors
pagg04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AL522_09145
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AL522_09145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagg03016
]
AL522_09145
Enzymes [BR:
pagg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
AL522_09145
Transfer RNA biogenesis [BR:
pagg03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AL522_09145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Glyco_hydro_42
Motif
Other DBs
NCBI-ProteinID:
AMG57791
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Position
1218232..1219680
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSPSVRLRFIKILASNIRNVLKTVSDDMAVVRYWDHIEVRSKNPALA
DIIPDELSRIPGIHHVLAVEYREYTDIHHIFEQTLAQYRDSLEGKSFCVRVKRRGKHSFS
SQDVERYVGGGLNQHIESARVQLKNPDVTVNLEVEENRLTLVTARYEGLGGFPIGTQEDV
LSLISGGFDSGVSSYMLLRRGSRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGRSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASTIAERYGVQALVTGEAVGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIISVAREIGTEDFASTMPEYCGVISKSPTVKAVKAKI
EAEEQNFDFSILDRVIEEATNVDIRTIAEQTEEEVVEVETVALLSDNDVVLDIRSIDEQE
EKPLTLNATEVKSLPFYKLSTQFGDLDQNRTWLLYCDRGVMSRLQALYLHEQGFKNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcatcaagttatttccagaaatcaccattaagagtccgtcggtgcgcttg
cgctttatcaagattcttgccagcaatattcgtaacgtcctgaaaaccgtcagcgacgac
atggccgttgtgcgctactgggatcacattgaagtgcggtcaaaaaatccggcactggcg
gacattattcccgatgagctttcccgcattcccggtatccatcacgttttagcggttgaa
tatcgcgagtacaccgatattcatcacatctttgaacagacgttagcgcagtatcgcgac
agtcttgaaggcaagagcttctgcgtacgtgtgaaacgtcgcggtaagcatagcttcagt
tcgcaggatgtagaacgctatgtgggtggtggtctgaatcagcatattgaaagcgcccgc
gtgcagcttaaaaaccctgacgtgacggtgaaccttgaagttgaagagaatcgcctgacg
ctggtgacggcgcgctacgaaggtctgggcggtttcccgatcggcacgcaggaagatgtg
ctgtcgctgatttccggcggtttcgactccggtgtctccagctatatgctgctgcgccgc
ggcagccgcgtgcattactgcttctttaaccttggcggtgccgctcatgagattggcgtg
cgtcaggttgcacattatctgtggaatcgttttggtcgttcacaccgcgtgcgcttcgtg
gcgatcaattttgagccggtcgtcggtgaaatcctcgaaaaagtggatgacggccagatg
ggcgtggtgctgaagcgcatgatggtgcgtgccgcctcgacaattgctgagcgctacggc
gtgcaggcgctggtcacgggtgaagcggtagggcaggtgtcgagccagacgctgaccaac
ctgcgcctgattgataacgcgtcggatacgttgatcctgcgtccgctgatctctcatgac
aaagagcacatcatcagcgttgcccgggagatcggcactgaagatttcgccagcaccatg
ccggaatattgtggtgtgatctcaaaaagcccgacggtgaaggcggtgaaggcgaagatc
gaagcggaagagcagaatttcgacttctcgattctggatcgggtcatcgaagaagcgacc
aacgtcgatatccgtactattgctgagcagacagaagaggaggtggtggaagttgagacc
gtcgcgcttctgagtgacaacgatgtggtgctggatatccgctctattgatgagcaggaa
gagaagccactgacgctgaacgccacggaagtgaagtcgctgccgttctacaaactcagt
acgcagtttggcgacctcgaccagaaccgcacctggttgctctactgcgatcgtggtgtg
atgagccgtctacaggcgctctatctgcatgagcagggctttaagaacgtaaaagtctac
cgcccgtag
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