Pseudomonas alcaligenes: A0T30_03800
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Entry
A0T30_03800 CDS
T04318
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
palc
Pseudomonas alcaligenes
Pathway
palc00730
Thiamine metabolism
palc01100
Metabolic pathways
palc01240
Biosynthesis of cofactors
palc04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A0T30_03800
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
A0T30_03800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palc03016
]
A0T30_03800
Enzymes [BR:
palc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
A0T30_03800
Transfer RNA biogenesis [BR:
palc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
A0T30_03800
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AMR65541
LinkDB
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Position
829046..830503
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AA seq
485 aa
AA seq
DB search
MKLIVKPFAEITIKSRPVRKQFIRQLAKNIRTVLRDLDPELEVQGEWDNLDLISGVTEPK
VRAEMFERLRCTPGVAHFLEVHEYPYVDFDDTFEKCRAHFGAQIAGKVFAVRCKRAGNTH
DFSSVDLATHVGSRLRRECGAAGIDLKKPEVEARFEVRYDRLLIVHAQHEGLGGYPLGSI
EQTLVLMSGGFDSTVAAYQMMRRGLLTHFCFFNLGGRAHELGVMEVAHHLWQKFGSSHRV
LFISVPFEEVVGEILGKVDNSQMGVVLKRMMLRAASRIAEDLHIDALVTGEAISQVSSQT
LPNLSVIDAVTDTLVLRPLIAAHKQDIIDTAVRIGTAEYAKNMPEYCGVISVNPTTRAKP
MRIEHEESQFDMAILERALERATRVTVDKVIDELGKDLQVEIVAEALAGQIVLDIRHPDA
AEDEPLQLDGVEVQALPFYALNNRFKELDETRQYLLYCDRGVMSRLHAHHLLSEGHANVR
VYRPH
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatcgtcaaacccttcgcggaaatcaccatcaagagccggccggtgcgcaag
cagttcatccgccagctggcgaagaacatccgcacggtgctgcgcgacctggaccccgag
ctggaggtgcagggcgagtgggacaacctcgatctgatcagtggggtgaccgagccgaag
gtgcgggcggagatgttcgagcgcctgcgctgcacgccgggcgtcgcccacttcctcgaa
gtgcacgagtatccctacgtcgatttcgacgacaccttcgagaagtgccgcgcgcacttt
ggcgcgcagatcgccggcaaggtctttgccgtgcgctgcaagcgcgctggcaacacccat
gatttctcctcggtggacctggcgacccatgtcggcagccgtctgcgtcgcgagtgcggt
gccgccggcattgacctgaagaagcccgaggtcgaggcgcgcttcgaggtgcgttatgac
cgcctgctgatcgtccatgctcagcacgagggcctcggtggctacccgctgggttcgatc
gagcagacgctggtgctgatgagcggtggcttcgactccacggtcgccgcctaccagatg
atgcgccgcggcctgctcacccacttctgcttcttcaatctcggcggccgtgcccacgaa
ctgggtgtgatggaagtggcccaccacctgtggcagaagttcggcagctcgcaccgcgta
ctctttattagcgtgccttttgaagaagtcgtgggcgagattcttggcaaggtcgacaac
agccagatgggcgtggtgctcaagcgcatgatgctgcgcgccgccagccgcatcgccgag
gacctgcacatcgacgcgctggtcaccggcgaggcgatcagccaggtgtccagccagacg
ctgccgaacctctcggtgatcgacgcggtcaccgataccctggtgctgcgcccgctgatc
gccgcgcacaagcaggacatcatcgatactgcggtgcgcatcggcaccgccgaatacgcc
aagaacatgcccgaatactgcggggtgatctcggtcaacccgaccaccagggccaagccc
atgcgcatcgagcacgaggagagccagtttgacatggccatccttgagcgcgccttggag
cgagcgacgcgggtgacggtggacaaggtgatcgacgagctgggcaaggacctgcaggtc
gagatcgtcgccgaggcgctggccgggcagatcgtgctcgatatccgtcatccggatgcc
gccgaggacgagccgctgcagctcgacggcgtcgaggtgcaggccctgccgttctacgcg
ctgaacaaccgtttcaaggaattggatgagacccgccagtacctgctgtattgcgacagg
ggcgtcatgagtcgcctgcatgcccaccatctgcttagcgaggggcatgccaatgttcgc
gtctatcgcccgcattaa
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