Pseudomonas alloputida: LU682_004890
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Entry
LU682_004890 CDS
T09345
Name
(GenBank) EAL domain-containing protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pald
Pseudomonas alloputida
Pathway
pald02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LU682_004890
Enzymes [BR:
pald01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LU682_004890
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
FtsL
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
WJR18167
LinkDB
All DBs
Position
complement(1081508..1083559)
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AA seq
683 aa
AA seq
DB search
MKLELRNSLSVKLLRVVLLSALAVGVVLSCAQIIYDTYKTRQAVDSDAQRILDMFRDPST
QAVYSLDREMGMQVMEGLFQDESVRMASIGHPNETMLAEKSRPLQDMSMRWLTDLILGQE
RTYTTQLVGRGPYSEYYGDLSITLDTSSYGKDFLINAVIIFISGVLRAMAMGLVLYLVYH
WLLTKPLSKIIEHLTQINPDRPSQHQIPLLKGHEKNELGLWVNTANQLLASIERNTHLRH
EAENSLQRMAQYDFLTGLPNRQQLQQQLDKILVDGGRLQHRVAVLCVGLGDFKGINEQFS
YQVGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPYEAAELAQSILDDLEVP
FDLDHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKARSRNRYQFYIASVDSEMR
RRRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQHPELGMVPPDQFIPLAE
QNGSIISIGEWVLDQACRQLREWHDQGFSDLRMAVNLSTVQLHHSELPRVVNNLLQAYRL
PPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIVAQGCHEGQGYHYS
KPLSARELTHFLKQAQRNRVSVS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggaattgcggaacagcttgtcggtcaagttgctcagggtcgtgctgctgtcg
gcgctggcggtcggcgtcgtgctcagctgtgcgcaaatcatctatgacacctacaagacc
cgccaggccgtggacagcgacgcccagcgcatcctcgacatgttccgcgatccttcgacc
caggcggtttacagcctcgaccgtgaaatgggcatgcaggtcatggaaggcctgttccag
gacgaatcagtgcgcatggcctccattggccatcccaacgaaaccatgctggcagaaaag
tcccgcccgctgcaggacatgtccatgcgctggctcaccgacctcatcctcggccaggag
cgcacctacaccacgcaactggtcggccgtggaccttacagcgaatactacggcgacctc
agcattaccctcgatacctcctcctacggcaaagatttcctgatcaacgcggtgatcatc
ttcatatccggcgtgctgcgggccatggccatgggcctggtgctttacctggtctaccac
tggctgctgaccaaaccgctgtcgaagatcatcgagcacctcacccagatcaaccctgac
cgccccagccagcaccagataccgctgctcaagggccacgagaaaaacgagctgggcctg
tgggttaacaccgccaaccagttgctggcctcgatcgagcgcaacacccatttgcgccac
gaggcggaaaacagcctgcagcgcatggcccagtacgacttcctcaccggcctgcccaac
cgccagcaactgcagcagcaactggacaagatcctcgtcgacggcggccgcctgcagcac
cgtgtggcagtgctgtgcgttggcctgggcgacttcaagggtatcaacgaacaattcagc
taccaggtcggtgaccagttgctgctggccctggccgatcgactacgcgcccacagcggc
cgcctgggcgctctggcgcggctgggcggcgaccagttcgccctggtacaggccaatatc
gagcagccctatgaggctgccgaactggcgcaaagcattcttgacgacctggaagtaccg
ttcgacctcgaccacgagcaaatccgcctgcgcgcgaccatcggcatcaccctcttcccc
gaagacggtgacagcaccgaaaaactgctgcagaaagccgaacagaccatgaccctggcc
aaggcccgctcgcgcaaccgctaccagttctatatcgccagcgtcgacagcgagatgcgt
cgccgtcgcgaactggaaaaggacctgcgtgaagccctgccccgcaaccagctgtacctg
gtgtaccagccacagatcagctaccgcgaccaccgagtggtcggcgtagaggccctgcta
cgctggcagcacccggaactgggcatggtgccacccgaccagttcatccccttggccgag
cagaacggcagcatcatcagcatcggcgaatgggtgcttgaccaggcctgtcggcaactg
cgcgaatggcacgaccagggcttcagcgacctgcgcatggcggtcaacctgtctaccgtg
caactgcaccacagcgagctgccacgggtggtcaacaacctgctgcaagcctatcgccta
ccaccgcgcagcctggaactggaagtcaccgaaaccggcctgatggaagacatcagcacc
gccgcccagcacctgttgagcctgcgccgctccggggcgctgattgccatcgacgacttc
ggcaccggctactcgtccctcagctatctgaagtcgctgcccctggacaagatcaagatc
gacaagagtttcgttcaggacctgctcgacgacgatgacgacgccaccatcgttcgcgcc
atcatccagctgggcaagagcctggggatgcaggtgatcgccgagggcgtggaaacggcc
gagcaggaaacctacatcgtggcccagggttgccacgagggccagggctaccactacagc
aagcccctttcggcccgtgaactgacccacttcctcaaacaagcgcaacgcaaccgggtt
tcggtgtcctga
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