Pteropus alecto (black flying fox): 102890464
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Entry
102890464 CDS
T02993
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03440
Homologous recombination
pale03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102890464 (BRIP1)
03460 Fanconi anemia pathway
102890464 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pale03400
]
102890464 (BRIP1)
Enzymes [BR:
pale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102890464 (BRIP1)
DNA repair and recombination proteins [BR:
pale03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102890464 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
102890464 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
102890464
NCBI-ProteinID:
XP_006924968
UniProt:
L5JSL0
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MSSMWSEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNNKQHCLLESPTGSGKSLALLCSA
LAWQQSLSGKPVDDSLSKKAEVPLSCCCTCHSKNFTNDDMHQGTSPHFNSPSTPPSERHG
TSSPCQDSPEKTTLAAKLSAKKQASMYRNENDDFQVEKKRIRPLETTQQIRKRHCFEKEV
RHLDTKIASGKTTKLNSPLGKTNSFSPQKLSGHCSRCYCSTKQGNGQDSSNAIKKDQGAK
SKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCME
LLDGKNGKSCYFYHGVHKISDQHTLQTFQGMYKAWDIEELISLGKKVKACPYYTARELME
NADIIFCPYNYLLDAQIRESMDINLKEQVIILDEAHNIEDCARESASYSVTEVQLRFARD
ELDSMVNNNIRKKDHGPLRAVCYGLINWLEANSEHLVERDYESSCKIWSGSEMLLNLQKM
GITTATFPILQGHFSAVLQKEEKISSIHGKEEAREVPIISASTQIMLKGLFMVLDYLFRQ
NGRFADDYKVAIQQTYSWINQTDALDKNGFLVLPKNKKCLRQKTAVHVLNFWCLNPAVAF
SDINDKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGQNL
CATFQHTETFAFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLDTGLWRDLELV
KTVIIEPQRGEKTNFDELLQVYYDAIKYKGGKDGALLVAVCRGKVSEGLDFSDDNARAVI
TIGIPFPNVKDLQVELKRRYNDQHSQLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWG
ALILVDDRFRSNPNRYISGLSKWIRQQIQHHSTFESALESLAEFSKKHQNVSDVSKEDRK
SIQDESTLEEACLKNNTSTHLLETASHLSPENPREDDPVLLEESTQAVKAEKIVISRSTS
PTFNKQTKRFSWSSFNSLGQSLTDKILTTTPKFRSLEDCASSSSTFKTEKGCKSVLPLTD
KFESSSLKVNTSVGLCPQSETIIPSIKIDSALLKKDHSKQLLCCEEALDSDIELSLVSEE
AKLSTSNTAFETEAEDDSIYFTPELYDPVDKNEENNELVETDRDNRLANNSNCILAEDLF
EIRTLKGVDSVREMKAEDCTDKVE
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatgtggtctgaatacacaattggtggggtgaagattaactttccttgtaaa
gcttatccatcacagcttgctatgatgaattctattgtcagaggattaaacaataagcag
cattgtttgttggagagccctacaggaagtggaaaaagtttagccttactttgttctgct
ttagcatggcaacaatcccttagtgggaagccagtggatgacagcttaagtaaaaaagct
gaagtaccattgtcatgttgttgtacatgccattcaaagaactttacaaacgatgacatg
caccaaggaacttcacctcatttcaatagtccaagtacaccaccttctgaaagacatggc
acttcatcaccttgtcaagactctcctgaaaaaactacactggctgcaaaactatctgcc
aagaaacaggcatccatgtacagaaatgaaaatgatgattttcaggtggagaagaaaaga
attcgacccctagaaactacacagcagattagaaaacgtcattgttttgaaaaggaagta
cgccatttggatacaaaaattgcttcaggaaagaccacaaaactcaactctcctttagga
aagacaaactccttttctccacaaaagctctctggtcattgttctaggtgctattgttct
actaaacaaggaaacggtcaagattcttcaaatgccattaagaaggatcagggggcaaaa
tccaagataccaaaaatatattttgggacacgtacacacaagcagattgctcagattact
agagagctccggaggacagcatactcaggggtcccaatgactattctttccagcagggat
catacttgtgtccatcctgaagtagtaggtaacttcaatagaaatgaaaagtgcatggaa
ttgctggatggaaaaaatggtaaatcctgttatttttatcacggtgttcataaaattagt
gatcaacacacattacagacttttcaagggatgtataaggcctgggacatagaagaactc
atcagcttggggaaaaaagtaaaggcatgcccatattacacagcacgagaactaatggaa
aacgctgacataatattttgtccctacaactatcttctagatgcacaaataagagagagt
atggatatcaatctgaaagaacaggttatcattttagatgaagctcataacatcgaggac
tgtgctcgggaatcagcaagttatagtgtaacagaagttcagcttcggtttgctcgagat
gaactagatagtatggtcaacaataacataaggaagaaagaccatggacccctacgagct
gtgtgctacggcctcattaattggttagaagcaaactctgaacatctcgtggaacgggat
tatgaatcatcatgtaaaatatggagtggaagtgaaatgctcttaaatttacaaaaaatg
ggcattaccacagctacttttcccattttgcagggacatttttctgctgtccttcaaaaa
gaagaaaaaatttcatcaattcatgggaaagaggaggcaagagaagtacctattattagt
gcttcaactcagataatgctcaaagggctttttatggtccttgactatctttttaggcaa
aatggcaggtttgcggatgattataaagttgctattcaacagacttactcttggataaat
cagactgatgcattagataaaaacgggttcttggttctaccaaaaaataagaaatgttta
cgacagaaaactgcagttcatgtgctaaacttttggtgcttaaatccagccgtggccttt
tcggatattaatgacaaagtgtggacaattgttttgacatctgggacattatcaccgatg
aaatccttttcatcagaacttggtgttacatttactatccagctggaggccaatcatgtc
attaataactcacaggtttgggttggcaccattggatcaggccccaagggtcagaatctc
tgtgctactttccagcacacagaaacatttgcattccaagatgaagtaggagcacttttg
ttatctgtgtgccagactgtaagccaaggaattttgtgtttcttgccatcttacaagtta
ttagaaaagttaaaagaacgttggcttgacactggtttgtggcgtgatctggagttggtg
aagacagtcattatagaaccacagagaggagaaaaaactaattttgatgaattactgcag
gtgtactatgatgcgatcaagtacaaaggaggaaaagatggagccctcctggtagcagtt
tgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgctgttata
actataggaattcctttcccaaatgtgaaagatctgcaggttgaactaaagcgacggtac
aatgaccagcattcacaattgagaggtcttttacctggtcgtcagtggtatgaaattcaa
gcatatagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgattgggga
gctcttattctagtagatgatcgtttcaggagtaacccaaatcgatacatatctggactt
tctaaatggatacggcagcagattcagcaccattcaacctttgaaagtgcactggagtcc
ttggctgaattttccaaaaagcaccaaaatgtcagtgatgtatccaaagaggacagaaag
tctatacaggacgagtctacacttgaagaagcctgtttgaagaacaatacctcaactcat
ttattagaaacagcaagtcatctatcaccagaaaatcctagagaagatgatccagtatta
ttggaagagtctacccaggcagtaaaagcagaaaaaattgtgatttccagatccacaagc
ccaaccttcaacaaacaaacaaagagatttagctggtctagctttaattctttgggacag
tctcttactgataaaattctgactaccacacctaaatttaggtcattagaggactgcgcc
tctagttcttccactttcaaaacagaaaagggatgtaaatctgttttgccactcactgat
aaatttgagtcctcgtctctgaaagtgaacacgtcagttggactatgccctcagtcagaa
accattattccatcaataaagattgattccgctcttcttaaaaaagatcattctaagcag
ctgctttgctgtgaagaagccctggattcggacattgaattgtctctagtaagtgaagaa
gctaaactttccacttcaaatacagcttttgaaacagaagcagaagatgactctatctat
tttacacctgagctgtatgatcctgttgataaaaatgaagaaaacaatgaactagttgaa
actgatagagacaatagattggctaataattcaaattgtattttagctgaagatcttttt
gaaattaggactctgaaaggagtagactcagtcagggaaatgaaagctgaggattgcaca
gacaaagttgaataa
DBGET
integrated database retrieval system
