Pseudomonas alcaliphila: UYA_08985
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Entry
UYA_08985 CDS
T06680
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pall
Pseudomonas alcaliphila
Brite
KEGG Orthology (KO) [BR:
pall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pall03009
]
UYA_08985 (rimO)
Enzymes [BR:
pall01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
UYA_08985 (rimO)
Ribosome biogenesis [BR:
pall03009
]
Prokaryotic type
ribosomal protein modification factors
UYA_08985 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
RNase_II_C_S1
TRAM
Motif
Other DBs
NCBI-ProteinID:
APU29858
UniProt:
A0A1L7FYE8
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All DBs
Position
complement(1944109..1945431)
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDAIGEALAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVNAVHQVIPPKTE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDLKYKLDFWNGQPVKTRMLELCEALSSMGVWVRLHYVYPY
PNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLEVVPDDVKQDRW
ERFMAHQQAISSARLQAKIGLEMDVLIDEVDGEGAVARSWADAPEIDGSVFIDSPNVKPG
DKVRVRIVDADEYDMWGELV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccacaccgaaagtagggtttgtctcccttggctgtccaaaagcgacggtc
gactccgagcgaatcctgacccagctgcgcatggaaggttacgagatcgtaccgacctac
caggatgccgacgtggtggtggtcaatacctgtggcttcatcgacagtgccaaggccgag
tcgctggacgccatcggtgaggcgctggcggagaacggcaaggtgattgtcaccggttgc
atgggcgtggccgaagacagcatccgcgacgtgcacccgagcgtgctggccgtcaccggc
ccgcagcaatacgagcaggtggtcaacgccgtacaccaagtcatcccgccgaagaccgag
cacaacccgctgatcgacctggtgccgccgcagggcatcaagctgaccccgcgccactac
gcttatttgaagatttccgaaggctgcaaccatacctgcagtttctgcatcattccgtcc
atgcgcggcaagctggtcagccgtccggtgggcgatgtgctcagcgaagccgagcgcctg
gtcaaagctggcgtgaaagagctgctggtgatcagccaggacaccagcgcctacggcgtc
gacctgaagtacaagctggacttctggaacggccagccggtgaagacgcgcatgctcgag
ctgtgcgaagcgctgtcgtcgatgggcgtgtgggtgcgtctgcactacgtttacccctac
cccaacgtcgacgatgtgatcccgctgatggccgccggcaaactgctgccgtacctggac
attcctttccagcacgccagcccgaaagtcctcaagtcgatgaagcgcccggccttcgaa
gacaagaccctggcgcgcatcaagaagtggcgcgagatctgcccggagctgaccatccgc
tccaccttcatcgtcggtttccctggcgagaccgaggaagacttccagtacctgctggac
tggctgaccgaagcgcagctcgaccgcgtcggctgcttccagtattcgcctgtagaaggc
gctcccgccaacgacctgggcctggaagtggtgcctgacgacgtcaagcaggaccgttgg
gagcgtttcatggcgcaccagcaggcgatcagcagcgcacgtctgcaggccaagatcggc
ctggagatggacgtgctgatcgacgaagtggacggcgaaggcgccgtggcccgctcctgg
gccgacgccccggagatcgacggcagcgtgttcatcgactcccccaacgtcaagccgggc
gacaaggtgcgtgtacgtatcgtcgacgccgacgagtacgacatgtggggcgagttggtc
tga
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