Paludicola sp. MB14-C6: RBG61_04645
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Entry
RBG61_04645 CDS
T09321
Name
(GenBank) sodium ion-translocating decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
palm
Paludicola sp. MB14-C6
Pathway
palm00362
Benzoate degradation
palm00620
Pyruvate metabolism
palm00650
Butanoate metabolism
palm01100
Metabolic pathways
palm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
palm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RBG61_04645
00650 Butanoate metabolism
RBG61_04645
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RBG61_04645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
palm02000
]
RBG61_04645
Enzymes [BR:
palm01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
RBG61_04645
Transporters [BR:
palm02000
]
Other transporters
Primary active transporters [TC:
3
]
RBG61_04645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Ndr
Motif
Other DBs
NCBI-ProteinID:
WMJ23962
UniProt:
A0AA51CQ52
LinkDB
All DBs
Position
complement(983650..984816)
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AA seq
388 aa
AA seq
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MFAQKPEIVIARIVLILLGILLVYLGAKQTLEPLIMIPMGLGMSAVNAGSLFLSATKIGN
LFIDPMVSKTDDLMNIMQIDWLQPIYTFTFSNGLIACLVFMGIGVLTDIGFVLAHPFISM
IIAMFAEFGTVATFPIAKLMGFSNGESAAISLIGGADGPMVLFGALTLAKDLFVPITIVA
YLYLSLTYGGYPYLIRLMVPKKIRATVITETKKPAHNITSKEKLIFAVVANTVLCLLFPV
AAPLFLSFFIGIAIRESGLDKYAKLVENVFLYGATFFLGLMLGVLCDATTILDPRIFKLL
VLGMLALLLSGIGGIAGGYIVYLFKKKNFNPVIGIAGVSCVPTTAKVAQKEVTKANKYSF
VMQYALGANVCGVITTAILTGLYVTFLR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacaaaaacctgaaattgttattgcaagaattgtgttgatactattgggtatt
ttattagtttatttaggcgcaaagcaaactttggagcctcttattatgattcctatggga
ttaggaatgtctgcggtaaatgcaggctcattatttttatcagcaaccaaaataggtaac
ttatttattgatccaatggtttcaaaaacagatgatttaatgaatattatgcaaattgac
tggttacaaccaatctatacctttacttttagtaatggattaatagcatgtttggtattt
atgggtattggtgttttaaccgatattggctttgtattggctcatccattcattagtatg
attattgctatgtttgctgaatttggtaccgttgcaacattcccaattgctaagttaatg
ggattttcaaacggcgaatcagcagctatttctctaatcggtggcgcagatggccctatg
gtattgtttggagcgcttacattagcaaaagatttgtttgttccaattaccattgttgct
tacttatatttaagcttaacctatggtggctatccatacttaattcgattaatggttccg
aaaaagattcgtgctactgtaataacagaaaccaaaaagccggcacataatattacttca
aaagagaagttgatttttgcggttgtagcaaatacagttttatgtttgttattcccagta
gctgctccattgttcttaagtttctttattggaatagcgattcgtgaatccggattagat
aaatatgcaaagcttgttgaaaatgtatttttatatggtgcaacgttcttcttaggattg
atgcttggtgtattatgtgatgcaacaacaattcttgatccaagaatattcaaattactt
gttttaggtatgcttgcattactgctatcaggtatcggcggtatcgctggtggatacata
gtatatctatttaaaaagaaaaacttcaacccggttattggtattgcaggcgtatcttgt
gttccaactaccgctaaagtagctcaaaaagaagtaacgaaagcaaataaatattcattt
gttatgcaatatgcattaggtgcaaatgtttgcggcgttattacaaccgcaatactgaca
ggcttatatgttacattcttacgataa
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