Paracoccus alcaliphilus: JHW40_13250
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Entry
JHW40_13250 CDS
T08960
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
palp
Paracoccus alcaliphilus
Pathway
palp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
palp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JHW40_13250
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palp01007
]
JHW40_13250
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palp03016
]
JHW40_13250
Enzymes [BR:
palp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
JHW40_13250
Amino acid related enzymes [BR:
palp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
JHW40_13250
Transfer RNA biogenesis [BR:
palp03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JHW40_13250
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1c
Anticodon_2
tRNA-synt_1
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
WCR17304
LinkDB
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Position
2570182..2571780
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AA seq
532 aa
AA seq
DB search
MTTLRDAAMKSKAWPFEEARRVLKRYEKKDPDKGHVLFETGYGPSGLPHLGTFGEVARTT
MIRRAFEMISDIPTRMICFSDDMDGMRKVPENVPRQDMLRQHLQQPLTTVPDPFGEYDSF
GAHNNAMLRRFLDTFGFEYEFISATEFYKSGRFDETLLRAAERYDAIMEVMLASLREERQ
QTYSCFLPVSPTSGRVLYVPIRHIDAKGGTITFDDENGQELTLPITGGNVKLQWKPDFGA
RWAALDVDFEMYGKDHSTNTPIYDRICEILGGRKPEHFTYELFLDQHGQKISKSKGNGLS
IDEWLTYAATESLSYFMFQKPKTAKRMYFDVIPKAVDEYHQQLRGYPDQTPEQQLANPVW
HIHGGDVPASDMVVPFQMLLNLASVAGAKDKDGLWGFIRRYAPEASPETHPGLDQAAGFA
VRYFTDFVAPTRQFRAPTDVERRALEDLAGRLAAWDQLADPEALQSMVFAIGKDHGFEPL
RDWFSALYQVLLGADQGPRFGGFIALYGIDETRALIEKALAGELAGPASSLV
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccctgcgcgacgccgcaatgaaatcgaaggcttggccgttcgaagaggcgcgc
cgggtgctgaaacgctatgagaagaaggaccccgacaagggccatgtcctgttcgagacg
ggttacggcccctcgggcctgccccatctcggcaccttcggcgaggtcgcgcgcaccacg
atgatccgccgcgccttcgagatgatcagcgacatcccgacccggatgatctgcttctcg
gacgatatggacgggatgcgcaaggtgcctgaaaacgtgccccggcaggacatgctgcgc
cagcatctgcaacagccgctgaccacggtgcccgatcccttcggcgaatatgacagcttt
ggcgcccataacaacgccatgctgcggcgcttcctcgataccttcggctttgaatacgag
ttcatcagcgcgacggagttctacaaatccggccgctttgacgagacactgctgcgggcc
gccgaacgttatgacgcgatcatggaggtgatgctggccagcctgcgcgaggaacgccag
cagacctacagctgtttcctgccggtcagcccgacatcggggcgggtgctttacgtcccg
atcaggcatatcgatgcgaagggcggcaccatcaccttcgacgacgagaatgggcaggaa
ctgaccctgccgatcaccggcggcaatgtgaagctgcaatggaagcccgatttcggcgcc
cgttgggcggcgctggatgtcgatttcgagatgtatggcaaggatcacagcaccaatacg
ccgatctatgaccggatctgcgaaatccttggcggccggaagcccgaacatttcacctat
gagctgtttctggaccagcacggccagaagatcagcaagtccaagggcaacgggctcagc
atcgacgaatggctgacctatgcggcgaccgaaagtctcagctatttcatgttccagaag
ccgaaaacggccaagcggatgtatttcgacgtcatccccaaggcggtggacgaatatcac
cagcagttgcggggatatcccgaccagacgccggaacagcagctggccaacccggtctgg
catatccatggcggcgatgtgcctgcctcggatatggtggtgccgttccagatgctgctg
aatctcgcctcggtcgcgggggccaaggacaaggacggcttgtggggcttcatccgccgt
tatgcccccgaggccagcccggaaacgcatccgggcctcgatcaggcggcgggctttgcc
gtgcgctatttcaccgatttcgtcgcccccacgcgccagttccgcgcgcccacggatgtc
gaacgccgcgcgctcgaggatctggccggccgccttgccgcatgggatcagctcgccgac
cccgaggcgctgcaatccatggtcttcgccatcggcaaggaccacgggttcgaacctctg
cgggattggttcagcgcgctctatcaggtgctgctgggcgccgatcaggggccgcgcttc
ggcggcttcatcgcgctttacggcatcgacgaaacccgcgccctgatcgaaaaggcgctg
gccggggaactggccggccctgcctcatctctggtgtga
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