Populus alba (white poplar): 118032535
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Entry
118032535 CDS
T07314
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118032535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118032535
Enzymes [BR:
palz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118032535
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
118032535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
118032535
NCBI-ProteinID:
XP_034893137
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MAALEGATVSVDSVAFSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGDE
PCKTCGQRSTNCTGHCGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVS
QLELIIKGDVVGAKRLDSFSPIEASLPEDSDGSSESCSTIHSGARHPNNEQSKQSEWTSL
QLSEAMSILNNFLKLESKKCKNCSTSNPNIRKPTFGWFHWAGLSNAAIRSNLIKQQTIEG
PFGGAFEELIDAEDVTKSPRNKESATNRNLKEHQKLQHQFTSQKDALSSQLLPSEAMNIL
KLLWKNEARLCSLMSDIQQQGVGKKKAGHSMFFLNTVLVPPIKFRPPTKGGDSVMEHPLS
VLLSKVLELNGSLADAHRSNDFPLIARRWLELQQSINVLFDSNTAKGQKDVISGICQILE
KKEGMFRQKMMGKRVNYACRSVISPDPYLDVNEIGIPPCFAVKLTYPERVTPWNVAKLRN
AVINGAESHPGATHYVDKLSTTKLPPNRKMRVSVARKLSGRSVDYEYEGKIVYRHLQDGD
IVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRA
EGYNIVNANNQYVRPSNGEPLRSLIQDHIISAVLLTKKDTFLTEDEVYQLLYSSGVSNAR
PTSFSGKAGRKVIFLSYEDEIETLDPAIRKPIYLWSGKQLITAVLNHITRGHPPFTVEKG
GKLSYDFFKNKIKNGKSSNGEKGGVSKPMKEKESGKVNPKEKQLEDDKMIIFRNVLVQGV
IDKAQFGEYGLVHTVQELFGAKAAGTLLSVFSRLFTAYLQMHGFTCGVDDLLITKIKDDE
RKKQLENCEKCGEQIHRKFIGIKDENIKIDPLELQSNIEKTIRSDGESALTYLDRQMTNE
LNSKTSSGVINELLSEGLLKPSGKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVP
RMVSGKTLPCFHPWDWAARAGGYIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY
LQRCLIKNLECLRIGYDHTVRDADGSIVQFYYGEDGVDVHQTGFIAKFEALAANREIMYE
KSDELGKFNAYISELPKALKEKAETFLRNIAKEQSSLHYPTKDRSSDLVEHDFYKLLKQK
FFLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADI
KTPIMTCPLQEGRTKEDAERLSDKLKKVTVADIVESMEVSVMPFAVQNDDLCRIYKLKMK
LYTPAHYPQHTDISVENWEETLEVLFVRELEDAIQNHLVLLSKISGIKNFLKASHSGTPI
EAEEDVSGNISREGENDDDSDDEEGEEADDLGLDVQKRKQQVTDEMDYDDGSEGLDVQKR
KQQVTDEMDYDDGSEGLDVQKRKQQVTDEMDYDDGSEGLLNEDEGDLSGSQVPSGSESDT
ELADKESEISNTDMVDYDSEYFEKPTHLGNYSKPKSRKKTSESSSQVEMHSKLKSTEKKK
QKAKGKKVRSKLVKKDFDRSIFVEAKGLHFEIHLKFDKEPHILLAEIAQKTAKKVCIQNP
GKVQRCQVTDCKENQVIYYGKDPKRRIDIEPGEKQKIPALHTIGVDFNTFWKMQDHLDVR
YMYSNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMS
RIGGISESISPLSKMSFETASKFIVEAALHGEVDNLEAPSARVCLGLPVKMGTGSFDLMQ
KLEI
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctagagggtgcaactgtgtcagttgattcggtagcgtttagcttcttaacg
gatgaagaggttcataagcatagttttgtaaagattaccagcgccagattgcttgatact
ttggacaaacctgtgcctggtggattatatgacccagcaatggggcctctaggggatgag
ccttgcaaaacatgcggtcaacgttcaactaattgcacaggtcattgtggccatatagat
ctgattagtccagtttacaatcctctgctctttaattttcttcataaacttctgcaaaga
acctgtttcttctgctttcattttagagcagatagcaaccaggttgagaaatttgtttct
caattggaactcatcataaaaggtgatgttgttggggctaaaaggttggattctttctcg
ccaattgaagcctcattgccagaagacagtgatggcagcagtgaatcttgttctacaatt
cattcaggagcacggcatccaaacaatgagcagtcaaagcagagcgaatggacctccctt
cagttatctgaagcaatgtctatcttaaataattttctgaagttggaatcaaagaagtgc
aagaactgttcaacatcaaatccaaatattcggaagcctacttttggttggtttcattgg
gcaggtttatcaaatgcagctatcagatcaaatctgattaagcagcagacaattgaaggg
ccatttgggggtgcatttgaagagttgatagatgcagaagatgtaaccaaatctcctcgt
aacaaagagtctgccacaaacaggaatttgaaagaacaccagaaattgcaacatcagttc
actagccagaaagatgctttgtcctcgcagttattaccatcagaagcgatgaatatttta
aagcttttgtggaaaaatgaagctcgactctgctcattgatgagtgacattcagcagcaa
ggagttggaaagaaaaaggcaggacattctatgttctttctgaacactgttttagtgcct
ccaatcaaattcaggcctccgaccaagggaggcgactctgtgatggaacatcctctatct
gttttgctgagcaaggtgctggaattgaatggatctttggcagatgcgcatagaagcaat
gatttcccattaatagctaggcggtggttggaacttcagcaatctataaatgtcttgttt
gattccaatactgccaagggtcagaaggatgtgatttctgggatatgccagatacttgag
aaaaaggagggtatgtttcggcagaaaatgatgggaaagagggttaattatgcatgccgg
tctgttatttccccagatccttatttagatgttaacgaaattggaattcctccgtgcttt
gcagtgaagttaacatatcctgagagagtgacaccttggaatgttgccaaattgagaaat
gctgtaatcaatggagctgaaagtcaccctggagctacacactatgtggataagctgtct
actactaagcttccaccgaatcgaaaaatgcgtgtttctgtagcaaggaaattatctggg
aggagtgttgattatgaatatgaagggaaaattgtatatcgccatttgcaagatggagat
attgtgcttgtcaatcgacagcctacacttcacaaaccaagtataatggcacatgtagtt
cgtgtattgaagggggagaagacactacgcatgcactatgcaaattgcagtacatacaat
gctgattttgatggtgatgaaatgaatgttcatttcccacaagatgaagtttctcgagct
gaaggttacaacattgttaatgcaaataatcaatatgtcaggccttccaatggcgaacca
cttagatccttgattcaggatcatattattagtgctgtgcttttaacaaagaaggacact
tttttgactgaggatgaagtttatcaactgctttatagttctggtgtgtcaaatgctcgt
ccaacatctttcagtggcaaagctggccggaaagttatattcttaagttatgaagatgag
attgaaacccttgatcctgcaataaggaaacccatttatctgtggtcaggaaaacagttg
attactgctgtgttgaatcacattacaaggggccatccaccattcactgttgagaaaggt
gggaagctttcgtatgattttttcaagaataaaattaagaatggcaaatctagcaatgga
gaaaaaggtggtgtaagcaaaccaatgaaggaaaaagagtctggcaaagtcaatccaaaa
gaaaagcagcttgaagatgataagatgattatctttaggaatgtattggtccaaggggtg
attgacaaggcccagtttggtgagtacggtttggtgcacacagttcaagaattgtttggt
gcaaaagcagctggcaccctgctctctgttttcagtcgtttattcactgcttatttgcag
atgcatggattcacatgtggagttgatgatcttttgataacgaaaattaaagacgatgaa
aggaagaagcaacttgaaaactgtgaaaagtgtggggaacaaattcatcgtaaatttatc
ggaatcaaggatgagaacattaagatagatccattggaattacaatcaaatattgagaaa
actatacgcagtgatggtgagtctgccttgacatatctggataggcagatgacaaatgaa
ctaaattccaaaacaagctcaggagtcatcaatgagctgttgtctgaagggttgctaaaa
ccctctggaaagaattgcatatcgcttatgactacatctggggctaaaggtagcaaggtc
aatttccaacagatatcttcttttctgggtcaacaggagttggaaggtaaaagagttcct
cgaatggtttctggaaagaccttgccctgctttcatccatgggattgggcagcccgtgct
ggaggctatattattgatcgttttctcaccggtctgcgtcctcaagaatattatttccat
tgtatggctggtcgtgaagggttggttgatacagctgtcaaaacatctcgcagtggatac
ctccaaagatgcctgattaaaaatcttgagtgcctcagaatcggctatgatcatacagtt
cgtgatgctgatggctcaattgttcaattttactatggagaagatggtgtggatgttcat
caaacgggctttattgctaaatttgaagccttggcagcgaatcgagaaataatgtacgaa
aaaagtgatgagcttggcaaatttaatgcttatatttcggaattgcctaaagctcttaaa
gaaaaagcagaaacattcctacgtaatatcgcaaaggagcagagttctttacattatccc
acaaaggatcggagttctgatttagtggaacatgatttctataagttactgaagcaaaag
tttttcctgagtcttgcacaaccaggagaaccagttggtgtccttgctgctcagtctgta
ggagaaccatcaacacagatgacgctgaacactttccatctagccgggcgtggtgaaatg
aatgtaacacttggaattccacgtctccaagagattttgatgactgcttcagctgatatc
aagactccgatcatgacctgccccttgcaggaagggagaactaaagaggatgctgagcgc
ctttctgataagttgaagaaggtcactgtagctgatatagtagagagcatggaagtgtct
gtcatgccatttgctgttcagaatgatgacctttgcagaatttataagcttaaaatgaag
ctttatacaccagcgcactacccacaacatactgatatatcagtagaaaattgggaagaa
acccttgaggtgttgtttgtgagagagttggaggatgctatacaaaatcatctggttttg
ctttctaaaattagcggcattaagaattttttgaaggcatcacattcagggacgccaatt
gaagcagaagaagatgtttctggcaacatatcacgcgagggtgaaaatgatgatgatagt
gatgatgaagaaggggaagaggctgatgatctaggtttagatgtgcagaaaagaaaacag
caagttacagatgagatggattatgatgatggctctgaggggttagatgtgcagaaaaga
aaacagcaagttacagatgagatggattatgatgatggctctgaggggttagatgtgcag
aaaagaaaacagcaagttacagatgagatggattatgatgatggctctgaggggttactg
aatgaagatgaaggggatttatcaggaagccaggttccatctggatctgaaagtgatact
gaactggctgataaagaaagtgagatcagtaacaccgatatggttgactatgacagtgaa
tattttgaaaagccaacacatcttggaaattactctaagccaaagtcaaggaagaaaacc
tcagaaagttcatcacaagtcgaaatgcattctaagctaaagtcaacagaaaagaagaaa
caaaaggccaagggaaagaaagttagatcaaaattagttaaaaaggactttgatagatca
atctttgtggaagccaagggattgcactttgaaatccatcttaaattcgacaaagaacct
catattttactggccgagattgctcagaagacagccaagaaggtctgtatccagaatccc
gggaaggttcaacggtgtcaagtgactgactgcaaagaaaatcaagtgatttactatggg
aaagaccccaagagaagaattgatattgaacctggggaaaaacaaaaaatcccagcgctt
catacaattggagtggacttcaatacattttggaaaatgcaagatcaccttgatgttagg
tatatgtattcaaatagcattcatggtatgttgaaagcttatggagtagaggccgcaaga
gagacaatcattagggagataaagcacgtgttcaattcttatggaatatctgtcaataca
cggcatttgtctcttattgctgattatatgacccataccggtgagtaccgcccgatgagc
cgtattgggggcatatcagagtcgatatcacccttaagtaaaatgtcttttgagacagcg
tccaaattcatagttgaagcagcattgcacggggaggtcgataatttggaagctccatct
gctagggtttgtcttggattgccagtgaaaatgggcactggatcttttgatttgatgcag
aaactggaaatttga
DBGET
integrated database retrieval system
