Pantoea ananatis LMG 20103: PANA_2043
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Entry
PANA_2043 CDS
T01195
Symbol
yciR
Name
(GenBank) YciR
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
pam
Pantoea ananatis LMG 20103
Pathway
pam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PANA_2043 (yciR)
Enzymes [BR:
pam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PANA_2043 (yciR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_10
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ADD77210
UniProt:
D4GF88
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All DBs
Position
2286009..2288018
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AA seq
669 aa
AA seq
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MYFLEGVTMTDEQGQSLLYTLFGTTSPHWRLTADSDALLFALDESSNTSVAVPLTPGQCS
LLRAMPVITSSINLTLTIHGEQVAMHFVGRRINQSVWAGTASAWGDTSAVARDLTLGLSF
AEQVVSEANSVIVILDQRGNIQRFNRLSEEYTGLYEQDVIGRNVFQLFMTKQEAAASRRN
IAGFFRDGNSYEVERWIKTMKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQER
LRVMANTDGITGLPNRHAIHQQISHALERAEGSETGVVYLDLDNFKKVNDAYGHMFGDQL
LQAVSLAILSCLSKNQTLGRLGGDEFVVLAEHTSQAALEAMATRILDRLRQPFRIGLIEV
YSGCSVGIALAPLHGEDRECLIRNADTAMYHAKENNRGSYCVFAEEMNRRVFEYLWLDTN
LRKALEQDHLLVHYQPKVDADGKVRSAEALVRWNSPERGLVSPGEFIPYAEESGLIVPLG
RWVMLNVLKQIIAWREQNIYLRVAVNVSARQLLDQTIYSDLKQALTDAGLTECPVDIELT
ESCLIENEAEALKLMRKFQELGAQIHLDDFGTGYSSLSQLARVPINAIKLDQSFIRNVNK
RPVSQSLVRAIVAVAKALDLQVIAEGIETVDEEAFVLKSGVDGRQGYFYAKPMPADQFGH
WLAQHPARV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcctggagggagtgaccatgaccgatgaacaagggcaatcgttgttgtatacc
ttgtttggtacaaccagccctcattggcgattaaccgcagacagtgatgcgctgcttttt
gccttagatgaatcatcgaacaccagcgttgctgtgccactgacgcccggccagtgcagt
ttattgcgcgcgatgcccgttattacttccagtattaatctgacgttaacgattcacggc
gagcaggtcgccatgcattttgttggccggcggatcaaccagtccgtgtgggcgggcacc
gcttcggcatggggcgatacgtcggcggtggcgcgcgatctgacgctgggcctgtcattt
gctgaacaggtcgtgtcggaggccaactcggtcatcgttatccttgatcagcgcggcaac
attcaacgctttaaccgcctcagcgaagagtataccggcctgtatgaacaggatgtgatc
ggccgtaatgttttccagctgtttatgacaaaacaggaagccgcggcctcacgcaggaac
atcgcagggttctttcgcgatggaaattcctacgaagtggaacgctggatcaagacgatg
aaaggacagcgactgtttctttttcgtaataagtttgttcacagtggcagcggtaaaaat
gaaattttcctcatctgttcaggaacggatattacggaagaacgccgtgcgcaagagcgc
ctgcgcgtgatggccaacaccgatggcatcactggcctgcccaatcgccacgcgattcac
cagcaaatcagccatgcgctggagcgggctgagggcagtgaaaccggcgtggtctacctg
gatttagataatttcaaaaaagtgaatgatgcctacggtcatatgttcggcgatcaactg
ttgcaggccgtttccctggcgattctgagctgtctgagcaagaaccagacgcttggacgg
ctgggcggtgacgagtttgtggtgctggctgagcacaccagtcaggctgcgctggaagca
atggctacgcgcattctcgatcgcctgcgtcagcctttccgcatcggcctcatcgaggtt
tacagcggctgctccgtcgggatcgccctggctccgctacacggagaggaccgtgagtgt
ctgattcgtaacgctgatacggcgatgtatcacgccaaagagaacaaccgtggcagctat
tgtgtttttgccgaggagatgaaccgccgggtttttgaatatctctggctcgacaccaac
ctgcgcaaagcgctggagcaagaccatttattagtgcactaccagcccaaagtggatgct
gacggtaaagtgcgcagtgcggaagcgctggttcgctggaactcacccgagcgcgggctg
gtttcacccggggaatttattccctacgcggaagaatccgggctgatcgtaccactgggt
cgctgggtcatgcttaacgtgctgaagcaaattattgcctggcgggagcagaatatttat
ctgcgcgtcgcggttaatgtctcggcgcgccagttactcgaccagacaatctacagtgac
ctgaaacaagccctgacggatgccggtttaaccgagtgcccggtggatatcgaactgacg
gaaagctgcctgattgagaatgaagccgaagcgctcaagctgatgcgtaaatttcaggaa
ctgggtgcccagattcaccttgatgactttggcaccggttattcctccctttcacagctg
gcgcgcgttcctattaatgctattaaactggatcaaagctttatccgtaatgtgaataaa
cgtcccgtttctcagtcactcgtcagggcgattgttgcggtagcgaaggcgcttgatttg
caggtgattgccgaaggtattgaaaccgtcgatgaagaagcctttgtgttaaaaagcggc
gtcgatgggcggcaaggctatttttacgcaaaaccaatgcccgccgatcagtttgggcac
tggctggctcagcatcctgcccgcgtgtaa
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