Pseudomonas amygdali: BKM19_002105
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Entry
BKM19_002105 CDS
T05354
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00250
Alanine, aspartate and glutamate metabolism
pamg00280
Valine, leucine and isoleucine degradation
pamg00310
Lysine degradation
pamg00410
beta-Alanine metabolism
pamg00640
Propanoate metabolism
pamg00650
Butanoate metabolism
pamg01100
Metabolic pathways
pamg01120
Microbial metabolism in diverse environments
Module
pamg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
BKM19_002105 (gabT)
00650 Butanoate metabolism
BKM19_002105 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BKM19_002105 (gabT)
00280 Valine, leucine and isoleucine degradation
BKM19_002105 (gabT)
00310 Lysine degradation
BKM19_002105 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BKM19_002105 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pamg01007
]
BKM19_002105 (gabT)
Enzymes [BR:
pamg01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
BKM19_002105 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
BKM19_002105 (gabT)
2.6.1.48 5-aminovalerate transaminase
BKM19_002105 (gabT)
Amino acid related enzymes [BR:
pamg01007
]
Aminotransferase (transaminase)
Class III
BKM19_002105 (gabT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AVB12540
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Position
complement(293957..295261)
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AA seq
434 aa
AA seq
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MNSKVDETPHLLRQRDQFVPRGIVTAHPLVIDRAQGSELWDVDGKRYLDFVGGIGVLNIG
HNHPNVVAAIQAQLTKVTHACFQVASYQPYLDLAKRLSHLIAGQSGIDHKAVLFTSGAEA
VENAVKIARAHTNRPAVISFRGGFHGRTLLGTTLTGMSQPYKQNFGPMAPEVFHTPYPNE
FRGVTTEVALAALHELLATQVAPERVAAILIEPMQGDGGFLTAPVEFMKALRALTEQHGI
VLIVDEIQSGFGRTGKWFGFEHSGIQPDLVTVAKSLAGGMPLSGVVGRAEIMDAPLPGGL
GGTYGGNALSCAAALAVIDTYEQDNLLARGEQLGQHLRAGLLKLKDRYNCIGDVRGTGFM
LAMELVKNDAARSPDADLNQKIIDQARIGGLLVIKCGVYRNVLRFLAPLVTTEQQIDEAL
SILDAALARVLKSS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaaagtcgacgaaacacctcatctgctccgccagcgcgatcagttcgtgccg
cgaggcattgtcacggcccatccgctggtcatcgaccgcgcgcaaggttctgaactgtgg
gacgtcgatggcaagcgctatctggatttcgtcggcggtatcggcgtgttgaacatcggc
cacaaccaccccaacgtggtcgcggcgattcaggcgcaactgaccaaggtcacccacgcc
tgcttccaggtggcgtcctatcagccctatctggatctggccaaacgcctgagccatctc
atcgcgggccagagcggcatcgatcacaaggccgtgcttttcacctctggcgccgaagcg
gtcgaaaacgcggtgaaaatcgcccgcgctcacaccaatcgcccggcagttatctcgttc
cgcggcggttttcatggccgtacactacttggcaccacgctgaccggcatgagccagccg
tacaaacagaatttcggcccgatggcccccgaagtgttccacacgccgtacccgaacgaa
ttccgcggcgtcaccactgaagtagcgctggcggcgttgcacgagctgttggccacccag
gtcgcaccggagcgtgtggcggcgattctgatcgagccgatgcagggcgatggcggcttc
ctgactgcgccggtggagtttatgaaggccttgcgtgcgctgaccgagcaacatggcatc
gtgctgattgtcgatgaaatccagtccggtttcgggcgtaccggcaaatggttcggtttc
gagcattcgggtatccagcctgatctggtgacggttgccaagagcctcgcgggcggcatg
ccgctgtcaggcgtggtcggtcgtgccgagatcatggatgcaccgcttccgggcggtcta
gggggcacttacggcggtaatgcgctgtcctgcgccgccgcactggcggtgatcgataca
tacgagcaggacaatctgctcgcgcgtggcgagcagctgggccaacatttgcgtgccggt
ctgctcaagctcaaggaccgttacaactgcatcggcgacgtgcgcggcaccggcttcatg
ctcgccatggaactggtcaagaacgacgccgcacgtagcccggacgctgatctcaatcag
aagatcattgatcaggcacgcattggcggcctgttggtgatcaagtgtggcgtgtaccgc
aacgtgttgcgtttcctcgcaccgctggtcaccacagagcagcagatcgatgaagcactg
agcattctcgatgccgccttggcacgagtattgaagtccagctga
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