Pseudomonas amygdali: BKM19_013345
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Entry
BKM19_013345 CDS
T05354
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00362
Benzoate degradation
pamg01100
Metabolic pathways
pamg01120
Microbial metabolism in diverse environments
pamg01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BKM19_013345 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
BKM19_013345 (pcaH)
Enzymes [BR:
pamg01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
BKM19_013345 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
DUF4198
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AVB14468
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Position
2674014..2674733
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AA seq
239 aa
AA seq
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MSAADNSRFVIRDRNWHPKALTPDYKTSILRSPRQALVSIPQSISETTGPDFSHLKFGQH
DNDLLLNFNNGGLPIGERILLAGRVCDQYGKPIPHTLVEIWQANAGGRYRHKRDAYLAPI
DPNFGGVGRALTDSEGNYSFRTVKPGPYPWRNGPNDWRPAHIHVSISGPSIATRLVTQLY
FEGDPLIPICPIVKAIANPDAVQSLIARLDLGMGNPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgcggacaatagccgcttcgtcattcgtgaccgaaactggcaccccaaagcc
ctgacacctgattacaagacctcgatcctgcgctcgccgcgtcaggcgctggtcagtatc
ccgcaatccatttccgaaaccacgggcccggatttctcgcatttgaagtttggtcagcac
gacaacgatctgctgctcaacttcaacaacggcgggctgcccatcggtgagcgcatcctg
ctggccggccgggtctgtgatcagtacggcaagccgattccgcataccttggtggagatc
tggcaagccaatgccggcgggcgttatcgccacaaacgcgatgcctatctggcacccatc
gaccccaactttggcggtgtagggcgagcgctgaccgacagcgaaggcaattacagcttc
cgcaccgtcaagccaggcccttacccgtggcgcaacggccctaacgactggcgtccggcg
catattcatgtgtcgatcagcggcccgtcgattgccacccgcctggtcacccagctgtat
ttcgaaggcgatccgttgattcctatctgcccgattgtcaaggccatcgccaacccggac
gccgtgcagagccttattgccaggctcgatctggggatgggtaatccaatggattgcctg
gcgtaccgctttgacatcgtgttgcgcggccagcgcaagacacacttcgaaaattgctga
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