Pseudomonas amygdali: BKM19_027365
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Entry
BKM19_027365 CDS
T05354
Name
(GenBank) sarcosine oxidase subunit beta family protein
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
pamg
Pseudomonas amygdali
Pathway
pamg00260
Glycine, serine and threonine metabolism
pamg01100
Metabolic pathways
Module
pamg_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BKM19_027365
Enzymes [BR:
pamg01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BKM19_027365
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BKM19_027365
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Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
FAD_binding_2
Thi4
FAD_oxidored
Pyr_redox_2
Pyr_redox_3
NAD_binding_9
FAD_binding_3
Trp_halogenase
MCRA
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AVB16865
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Position
5595982..5597232
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AA seq
416 aa
AA seq
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MQHYSGFGLLKHSLSHHENWQRMWRTPTPKKVYDVVIVGGGGHGLATAYYLAKEHGITNV
AVVEKGWLGGGNTARNTTIVRSNYLWDESAHLYEHAMKLWEGLSQDLNYNVMFSQRGVYN
LCHTLQDMRDSERRVSANRLNGVDGELLNGKQVAEEIPYLDCSKNTRYPIIGATVQRRGG
VARHDAVAWGFARAADALGVDLIQQTEVIGFRKENGVCIGVETNKGFIGAKRVGVVTAGN
SGHMAKLAGFRLPIESHPLQALVSEPIKPIIDSVIMSNAVHGYISQSDKGDLVIGAGIDS
WVGYGQRGSYPVIEHTIQAIVEMFPVLSRVRMNRQWGGIVDTTPDACPIISKTPVPNMFF
NCGWGTGGFKATPGSGNVFAASLAKGEMHPLAKPFSIDRFHNGALIDEHGAAAVAH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcagcattactcaggcttcggccttctcaagcattccctcagccatcacgaaaactgg
cagcgcatgtggcgcacgccgaccccgaaaaaggtctacgacgtggtcatcgtcggcggt
ggcgggcacggtctggcgactgcctactatctggccaaggagcacggcatcaccaatgtg
gccgtggtcgagaaaggctggctgggcggcggcaacaccgcacgtaacaccaccatcgtg
cgctccaactacctgtgggacgagtcggcccacctttatgagcacgcgatgaaactgtgg
gaaggcctgtctcaggacctgaactacaacgtcatgttttcccagcgcggcgtctacaac
ctgtgccacaccttgcaggacatgcgcgactccgagcggcgtgtcagtgccaaccgcctg
aacggtgtagatggcgaactgctcaacggcaagcaggtcgcagaggaaatcccatacctg
gactgctcgaaaaacacccgctacccgatcatcggcgcaaccgttcagcgccgtggcggc
gtagctcgtcacgacgcagtggcctggggctttgcgcgtgccgccgacgccctgggcgtg
gaccttatccagcagaccgaagtcatcggctttcgcaaggaaaacggcgtgtgcatcggc
gtcgaaaccaacaagggtttcatcggtgccaaacgtgtcggcgtggtaaccgccggtaac
tccgggcacatggccaaactggcgggctttcgtctgccgatcgaatcacatcctttgcag
gcactggtctccgagccgatcaagccgattatcgacagcgtcatcatgtccaacgccgtg
catggctacatcagccagtccgacaagggcgacctggtgatcggtgccggtatcgacagc
tgggtcggttatggccagcgtggctcatacccggtgatcgaacacactattcaggccatc
gttgagatgtttccagtgctgtcgcgtgtgcgcatgaaccgccagtggggcggcatcgtc
gacaccacgccggacgcctgcccgatcatttccaagacgccggtgccgaacatgttcttc
aactgcggctggggcacaggcggcttcaaggccacgccgggctcgggcaacgtatttgcc
gccagcctggccaagggcgagatgcacccgctggccaagccgttctccatcgaccgtttc
cacaacggcgcgctcatcgacgaacacggcgctgcagccgtagcccactaa
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