Paenibacillus amylolyticus: P9222_04715
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Entry
P9222_04715 CDS
T09036
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pamy
Paenibacillus amylolyticus
Pathway
pamy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pamy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P9222_04715 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pamy03021
]
P9222_04715 (rpoE)
03400 DNA repair and recombination proteins [BR:
pamy03400
]
P9222_04715 (rpoE)
Transcription machinery [BR:
pamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P9222_04715 (rpoE)
DNA repair and recombination proteins [BR:
pamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P9222_04715 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
BUD22
Mnd1
CMD
Motif
Other DBs
NCBI-ProteinID:
WFR63606
LinkDB
All DBs
Position
complement(934372..934941)
Genome browser
AA seq
189 aa
AA seq
DB search
MSTSLNLKIDKEKVREIPLVDLAFMVLKAANTPYYYRDLMNEVAKQRGMTDEEINEFIAQ
LYTEINIDGRFACVGTSLWGLKRWYPVAGTEDSMTGAKRPRIINDEDDDLEDEDFGEEED
SYNSDEDFDSTDKDEDEDEEDEDEDDIFDEEDSEEEVLVEDDDLEDEDLDEDEEESENED
EFDDDSDNR
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacctcgctcaatttgaaaattgataaagaaaaggtaagagagatccctttggtg
gaccttgcctttatggtgctgaaagcggctaatacgccgtattactatcgtgacttgatg
aatgaggtagcgaagcagcgcggaatgactgatgaagaaatcaacgagtttatcgcccag
ctatataccgagattaatatcgatggtcgttttgcttgcgtcggtacaagtctgtggggc
ttgaagcgctggtatccggtagccggaacggaagattccatgacgggtgcgaagcgtccg
cgtatcatcaacgatgaagatgatgatctggaagatgaagacttcggtgaagaagaagat
agctataacagcgatgaagacttcgacagcacggataaagacgaggatgaagacgaagaa
gatgaagacgaagacgacatctttgatgaagaagacagcgaagaagaagtgctggtcgaa
gatgacgatctggaagatgaagacctcgacgaagacgaagaagagtccgaaaacgaggat
gaatttgacgacgattctgataatcggtag
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