KEGG   Podospora anserina: PODANSg6784
Entry
PODANSg6784       CDS       T01048                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
pan  Podospora anserina
Pathway
pan03020  RNA polymerase
pan03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PODANSg6784
  09124 Replication and repair
   03420 Nucleotide excision repair
    PODANSg6784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pan03021]
    PODANSg6784
   03400 DNA repair and recombination proteins [BR:pan03400]
    PODANSg6784
Transcription machinery [BR:pan03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PODANSg6784
DNA repair and recombination proteins [BR:pan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PODANSg6784
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L PriA_CRR
Other DBs
NCBI-GeneID: 6193904
NCBI-ProteinID: XP_001909748
UniProt: B2B158
LinkDB
Position
3
AA seq 334 aa
MDYDPMAMDDAESLGPVVKISQADSVRVKFELQNADISFANSLRRVMLAEIPTIAIDLVE
IESNSSVLADEFIAHRLGLIPLNAEGVEHLLYSRDCDCEEYCENCSVKLTLHAKCTGYEN
MSVSARDLVPVGERINQSLGTPVINDKDGTGPLILKLRPEQEIKLECIAKKGIAKEHAKW
APSAAIGFEYDPHNKLRHLDLWYEKDPKSEWPPSEYAKWEEPPVEGEPFDFDAVPNHFYY
NVETAGNLPPDGIVTEGIKVIQQKLAGLIHELTEGEGEGGYDGPRSPDYNSGPDTGYGYS
TSYGGNGGNQSAWGGGGGTTPFGGQTSYGGGGWS
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggattacgatccgatggcaatggatgacgccgagtcgctcgggcccgtcgtcaagatc
tcgcaggccgactcggtccgcgtcaagttcgaactccagaatgccgacatctcgttcgcc
aactcgctgcgccgcgtcatgctggccgagatcccaaccatcgccatcgacttggtcgag
attgaaagcaacagctcggttcttgctgacgaattcatcgcccaccgtcttggtcttatc
ccactcaacgccgagggtgtcgagcacctcctctattcccgcgactgcgactgcgaagag
tactgcgaaaactgcagcgtgaagctcacgctccatgccaagtgcactggctacgagaac
atgtcggtatccgcgcgcgatttggtacctgttggcgagcgcataaatcaatctctgggc
acgccagttattaacgacaaggacggcaccgggccgctcattctcaagctgcgccccgag
caggagatcaagctcgagtgtatcgcgaagaagggcattgcgaaggagcatgcgaagtgg
gcaccaagcgcagccatcgggtttgaatatgacccccacaacaagctccgccatcttgac
ctttggtatgagaaggatcccaagtcggaatggcctcctagcgagtatgccaagtgggaa
gagccaccagtggaaggcgagcctttcgactttgacgccgtccccaaccacttttactac
aacgtcgagacagccggtaacctgccaccagacggaatcgtcaccgagggcatcaaggtc
atccagcaaaagctcgctggtctgattcacgagttgactgaaggggagggtgaaggtggc
tacgacggaccccgcagcccagattacaacagcggtcctgacaccggctatgggtactcg
acatcctacggcggaaatggcgggaaccagagcgcctggggtggcggcggcggaaccact
ccattcggcgggcagacttcctatggcggtggcggttggtcttga

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