KEGG   Pandoraea sp. XY-2: DRB87_05215
Entry
DRB87_05215       CDS       T06086                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pand  Pandoraea sp. XY-2
Pathway
pand00740  Riboflavin metabolism
pand01100  Metabolic pathways
pand01110  Biosynthesis of secondary metabolites
pand01240  Biosynthesis of cofactors
pand02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pand00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    DRB87_05215 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DRB87_05215 (ribD)
Enzymes [BR:pand01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     DRB87_05215 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     DRB87_05215 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD 2CSK_N
Other DBs
NCBI-ProteinID: QBC30882
LinkDB
Position
complement(1121160..1122257)
AA seq 365 aa
MFSEQDFSYMRRALALAERAMFTTTPNPRVGCVIVQDGRIIGEGFTQPAGQDHAEVQAMK
DARTRGESVRGATAYVTLEPCSHYGRTPPCAKGLIDAGVKRVIAAMEDPNPLVAGRGLSL
LRDAGIEVRCGLLEHEAREMNIGFVARMTRGTPWVRMKVAASLDGKTALHNGVSQWLTGP
AARADGHAWRARACAILTGIGTVREDDPSLTVREVETTRQPLRIVVDSRLEISPTAKVLA
NGNALVICANGDHERASRLRDLGVEVLDLPNTTGKVDLSALLRALGERQLNELHVEAGYK
LNGSLLRERCVDELLTYLAPCIVGDAQGMFHLPALTSLDDKLALEFTDVRMIEGDLRVMA
RVKRD
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgttctccgaacaggatttctcttatatgcgtcgcgcgctggcgctcgccgagcgcgcg
atgttcaccaccacgccgaatcctcgcgttggctgcgtaatcgtgcaggacggacggatc
atcggcgaaggcttcacgcagccggccggccaggatcacgccgaagtgcaggccatgaaa
gacgcgcgcacgcgcggcgagtccgtgcgtggcgccacggcctatgtcacgctcgaaccg
tgcagccattacggccgcaccccaccgtgcgcgaagggactcatcgacgcgggcgtgaaa
cgcgtgatcgccgcgatggaagatccgaacccgctcgtggccgggcgcggcctgagcctg
ctgcgcgacgcgggcatcgaagtgcgctgcggactgctggagcatgaggcgcgcgaaatg
aacatcggattcgtcgcccgcatgacgcgcggcacgccgtgggtccgcatgaaggtagcg
gccagcctcgacggcaagaccgccctgcacaacggcgtgagccaatggctgaccggcccg
gccgcgcgcgccgacggccacgcgtggcgggcgcgcgcgtgcgccattctcaccggcatc
ggcacggtgcgcgaggacgatccgtcgctcaccgtgcgcgaggtggaaacgacacgccag
ccactgcgcattgtcgtcgattcacgtcttgagatttccccgaccgcgaaggtgctcgcg
aacggcaacgcgctcgtgatctgcgccaacggcgatcacgagcgtgcgtctcgtctgcgc
gacctgggcgtggaggtgctcgacctgcccaatacgaccggcaaggtcgacctctcggcg
ctgctgcgcgcgctcggcgagcgccagctcaacgaactccatgtagaggcgggctacaag
ctcaacggctcactgctgcgcgagcgctgcgtggacgagttgctcacctacctcgcgccg
tgcatcgtcggtgacgcgcaaggcatgttccacctgcctgcgctcacgtcgctcgacgac
aagctcgcgctcgaattcacggacgtgcgcatgatcgaaggcgatctgcgggtgatggct
cgcgtcaaacgcgactga

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