Pseudomonas anuradhapurensis: HU763_018330
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Entry
HU763_018330 CDS
T07691
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
panh
Pseudomonas anuradhapurensis
Brite
KEGG Orthology (KO) [BR:
panh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
panh03009
]
HU763_018330 (rimO)
Enzymes [BR:
panh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HU763_018330 (rimO)
Ribosome biogenesis [BR:
panh03009
]
Prokaryotic type
ribosomal protein modification factors
HU763_018330 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
RNase_II_C_S1
DUF5005
Motif
Other DBs
NCBI-ProteinID:
QXI46709
LinkDB
All DBs
Position
3995964..3997295
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AA seq
443 aa
AA seq
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MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGSIREVHPSVLSVTGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDRTLARIKQWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLSEAQLDRVGCFQYSPVEGAPANDLGLEEVPDEVKQD
RWDRFMAHQQAISAARLQLRIGKEIDVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRVVDADEYDLWAEPI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccacgcccgccacccccaaggtaggtttcgtaagcctgggttgcccgaaagcc
ctggtcgattccgagcgcatcctgacccagctgcgcatggaaggctatgaagtcgtgccc
acctatgaggacgccgacgtggtggtggtcaacacctgcggcttcatcgacagcgccaag
gccgagtcgctggaagtgatcggcgaagcgatcaaggaaaacggcaaggtcatcgtcacc
ggctgcatgggtgtcgaggaaggcagcatccgtgaggtgcacccgagcgtgctgtcggtc
accggcccgcagcagtacgagcaggtggtcaacgccgtgcacgaagtggtgccgccacgc
caggaccacaacccgctgatcgacctggtgccgccgcagggcgtcaagctgaccccgcgc
cactatgcgtacctgaaaatttccgaaggctgcaaccacagctgcagcttctgcatcatc
ccgtcgatgcgcggcaaactggtcagccgcccggtcggtgaagtgctgagcgaggccgag
cgcctggtcaaggccggggtcaaggagatcctggtaatttcccaggacaccagcgcctac
ggcgtcgacgtcaagtacaagaccgacttctggaatggccgcccggtcaagacccgcatg
ctcgagctgtgcgaagccctgagcagcctgggcgcctgggtccgcctgcactatgtctac
ccgtacccgaacgtcgacgacgtgatcccgctgatggccgccggcaagatcctgccgtac
ctggacatcccgttccagcatgccagcccgaaagtgctcaaggccatgaagcgcccggcc
ttcgaagaccgcaccctggcccgcatcaagcaatggcgcgaacagtgcccggagctggtg
atccgctccaccttcatcgtcggcttcccgggcgagaccgaggaagacttccagtacctg
cttgactggctgagcgaagcccagctggaccgcgtgggctgcttccagtactcgccggtg
gaaggcgccccggccaacgacctgggcctggaagaagtaccggacgaggtcaagcaggac
cgttgggaccgcttcatggcccaccagcaggccatcagtgctgcccgcctgcagctgcgt
atcggcaaggagatcgacgtgctgatcgacgaagtcgaagaacagggctcggttggccgc
agcttcttcgacgccccggaaatcgacggcagcgtgttcatcgacggcgatcatggcttc
aagccaggcgacaaggtgcgttgccgggtggtggatgccgacgagtacgacctctgggct
gaaccgatctga
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