Polynucleobacter antarcticus: DCO16_05730
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Entry
DCO16_05730 CDS
T08332
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pani
Polynucleobacter antarcticus
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pani03009
]
DCO16_05730
Enzymes [BR:
pani01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DCO16_05730
Ribosome biogenesis [BR:
pani03009
]
Prokaryotic type
ribosomal protein modification factors
DCO16_05730
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QKM62607
UniProt:
A0A6M9PUP2
LinkDB
All DBs
Position
complement(1093485..1094843)
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AA seq
452 aa
AA seq
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MAGKVGFVSLGCPKALVDSELILTQLSAEGYETSKDYAGADLVVVNTCGFIDSAVEESLA
AIGDALSENGKVIVTGCLGARKNTDGSDLIKSIHPKVLAVTGPHATAEVMQAIHVHLPKP
HDPFTDLLPPIGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLLEATKL
FESGVKELLVVSQDTSAYGVDIQYRTGFWDGKPVKTRMFDLVNALNQIAREHQAWVRLHY
VYPYPHVDDILPLMAEFADHGYGVLPYLDIPLQHAHPDVLKRMKRPASGERNMERIQAWR
AACPDLVIRSTFIAGFPGETEAEFQYLLDFLDEAQIDRAGCFAYSPVAGATANLLDSPVP
EVIREERRARFMAKAEEISIKRLSKKVGKRIGVLIDRVDESGGIGRSVGDAPEIDGLVRV
LPASKPSKRFRVGDMIKVTVISAQGHDLIAET
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggctggtaaagttggttttgtttccttgggatgccccaaggcattggtagattctgag
ctcatcctgacgcaattaagtgctgaaggttatgagacttccaaagattatgcaggtgcc
gatctggtggttgtgaatacttgcggctttattgattctgccgtggaggaaagtcttgct
gctatcggtgatgctttatctgaaaacggtaaagtcatcgtgacaggttgtttaggcgcc
cgtaagaatacagatggcagtgatctgattaaaagtattcaccccaaagtccttgctgtt
acaggcccacacgccactgctgaagtgatgcaggcaattcatgtccatttgcctaagccg
catgatccctttacggatttattgccgcccataggtatcaagctcacacctaggcactac
gcttatttgaaaatctctgaaggttgcaatcaccgttgcaccttctgcatcattccgagc
atgcggggtgatttagtttctcgacctattggtgaagtgttgctagaggctaccaagtta
tttgaatcaggcgtaaaagagttgttagtggtatctcaagatacaagtgcctatggggtt
gatattcaataccgcaccggtttttgggatggtaagcccgtcaaaactcgcatgtttgat
ttagttaatgcactgaaccagatcgctagagaacatcaagcttgggttcgtttgcattac
gtttacccttatcctcacgtcgatgacatcttacctttgatggctgagtttgcggatcat
ggttatggtgttttgccgtatttagatattcctttgcagcacgctcatccagatgttctt
aaacgtatgaagcgtcctgcaagtggtgagagaaatatggagcgtattcaggcctggcgc
gctgcttgtcctgacttggtaattcgcagtacgtttattgctggcttcccaggcgagact
gaggcggagtttcaatatttattggattttttagatgaggcacaaattgaccgcgcaggc
tgttttgcctattcccctgtggcgggtgctacggcgaatttattagatagtcccgtacct
gaagtgattcgtgaggagcggcgagcccgttttatggcaaaggctgaggaaatatcgatc
aaacgactcagtaaaaaggttggcaaacggattggcgtcctcattgatcgagtagatgaa
tctggtggaattgggcgtagcgtaggtgatgcccctgaaatagatggcctagtccgtgtt
ttaccggcaagtaagccttctaagcgctttcgggttggggatatgattaaggtaacagtt
atcagcgcacaagggcatgacctaatagccgagacatga
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