Pantoea anthophila: OJ965_20275
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Entry
OJ965_20275 CDS
T08866
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pano
Pantoea anthophila
Brite
KEGG Orthology (KO) [BR:
pano00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
OJ965_20275 (hmsP)
Enzymes [BR:
pano01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
OJ965_20275 (hmsP)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
UZH02964
LinkDB
All DBs
Position
complement(3818051..3820057)
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMATVSLVAVITISIFIVIQLFHFVQQRRIDYAQQMENIAHTVRQPLSEA
VLRADIPRAEHILHSLKPAGILSRADVVLPNAFQALHADFETEKPVPRLVARLFELPVQI
TLPLYSIENTRMPKPLAYLVLQANSTRVYQFILSTLSTMIITYLLLALILSVAISWCINR
LVVHPLRHLSRELQELPPQAILTHKLSLPQSHHDDEIGMLVRSYNRNQQVLESIHDEMSR
LTTHFPVTDLPNRTLFLALVEQFMCNPERSLGLMVIRIETLQEANGILSDEQRDTLMLTL
VEKIRHTLDDHTLLAQTGVSDFVLLMKRASNPFRALRLARNLMIRLNQPVSLHQLQLRPN
VSIGLALRDDQPLSASELLDRAISAMMSARHQGKNQILFFDAALTERAQKRLTQEHDILQ
GLYDEQFALYLQPQVDMRTGALAGAEALLRMRQPDGSYGLTEEFIASAEEIGVISAVGRW
VFEEACRILAGWQRQGMMLPLSVNISAVQLRDTGVVSHLQSLLTRHRIAPGTFVLEVTET
AHLDDAEQAIAMLRLLQQAGVAVALDDFGMGYSNLNYLHQLKALPVNKLKMDRSFVAALP
DDDTMVCIVAAIAEIIHLEVIAEGVETAEQRDWLLARGIHIGQGYLYAEALPLTRFNQAW
IENSSLPQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtaagccggtcacttacgataaagcagatggcgacggtttcgctggttgcggtt
atcaccatcagtatttttatcgtcatccaactgtttcattttgtgcagcagcgcaggatt
gactacgcccagcagatggagaatatcgcccacaccgttcgtcagccgctgtcggaagcg
gtgctgcgggccgacatcccccgggccgaacacattcttcactctctgaaaccggccggt
atcctgtcgcgcgccgatgtggtgctgcccaatgcgtttcaggcgctgcatgctgacttt
gagacggaaaaaccggtgccgcgtctggtggcccgcctgtttgagctgccggtgcagatt
acgctgccgctctactcgatagaaaataccagaatgccaaaaccgctggcctatctggtg
ctgcaggcgaactcaacgcgcgtctaccagtttattctcagcacgctctcgaccatgatc
atcacctatctgctgctggcgctgatcctctccgtggcgatcagctggtgcatcaaccgg
ctggtcgtccatcccctgcgtcatctctcgcgcgagctgcaggagctgccgccgcaggcg
attctgacccataaactctccctgccgcaaagtcatcacgatgacgagatcggcatgctg
gtgcgcagctacaaccgcaatcagcaggtgctggagtcgattcatgatgagatgagccgg
ctgaccacccacttcccggtcaccgacctgcccaaccgcaccctgttcctggcgctggtc
gaacagttcatgtgcaatcctgaacggtcgctgggtctgatggtgatccgcattgaaacc
ttgcaggaagccaacggcatactcagcgatgagcagcgcgacacgctgatgctgacgctg
gtggagaagatccgccatacgctggatgaccacaccctgctggcgcagaccggcgtcagc
gattttgtcctgctgatgaagcgcgccagtaatccgttccgcgccctgcgtctggcgcgc
aatctgatgattcgccttaatcagccggtcagcctgcaccagcttcagctgcgccctaac
gtcagcatcggtctggcgctgcgcgacgatcagccgctgagcgccagtgaactgctggac
agggcgatctcggcgatgatgtcggcccgtcatcagggcaaaaatcagatcctcttcttt
gacgccgcgctgaccgagcgcgcacagaaacgcctgacccaggagcatgacattctgcag
ggtctgtacgatgagcagtttgctctctacctgcaaccgcaggtcgatatgcgcaccggg
gcactggcgggcgcggaagcgctgctgcgtatgcgccagccggatggcagttacggcctg
acggaagagtttatcgccagcgccgaagagataggcgtgattagcgcagtgggacgctgg
gtgtttgaagaggcgtgccgcattctggctggctggcagcggcagggcatgatgctgccg
ctgagcgtgaatatctctgcggtacagttgcgcgatacgggcgtggtctcccatctgcag
tctctgctgacccgtcaccgcatcgcccctggcacttttgtgctggaagtgaccgaaacg
gcgcatctggatgatgcagaacaggcgatagcgatgctgcgactgttgcagcaggccggg
gtggcggtggcgctggatgatttcggcatgggctactccaatctcaactatctgcatcag
ctgaaagcgttgccggtcaacaagctgaagatggaccgcagctttgtggcggcactgccg
gatgacgacaccatggtctgcatcgtggcggctatcgccgagattatccaccttgaggtg
attgccgagggcgtggaaaccgcggagcagcgtgactggctgctggcgcgcggcattcac
atcgggcagggctacctctacgcggaagcgctgcctctgacccgattcaatcaggcctgg
atagaaaactcctcactgccgcaataa
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