Pantoea sp. SO10: FCN45_03890
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Entry
FCN45_03890 CDS
T06053
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
pans
Pantoea sp. SO10
Pathway
pans00310
Lysine degradation
pans01100
Metabolic pathways
pans01110
Biosynthesis of secondary metabolites
pans01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
FCN45_03890
Enzymes [BR:
pans01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
FCN45_03890
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
QCP58576
LinkDB
All DBs
Position
866591..868741
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AA seq
716 aa
AA seq
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MNIIAIMGPHGAFYKDEPIRELDAALKLQGFQTVYPNNASDLLKLIEHNPRICGVIFDWD
DYSLALCSDINQLNEYLPLYAFINTHSQMDVSINEMRMALHFFEYALSAADDIALHIRQY
TDEYIDNITPPLTKALFTYVKEGKYTFCTPGHMGGSAFQKSPVGSLFYDFFGSNTLKADV
SISVTELGSLLDHTGPHLEAEEYVARTFGAEQSYMVTNGTSTSNKIVGMYAAPVGSTVLI
DRNCHKSLTHLLMMSDIIPIWLKPTRNALGILGGIPQREFTRDSIQQKVNATPRASWPVH
AVITNSTYDGLLYNTQFIKQTLDVPSIHFDSAWVPYTNFHPIYAGKSGMSGDRIPGKVIY
ETQSTHKLLAAFSQASLIHIKGDYDEHTFNEAYMMHTTTSPSYAIVSSIETAAAMLRGNP
GKRLINRSVERALHFRREIQRLREESDGWFFDIWQPEQVDQAECWPIQPGEEDWHGFTHA
DRDHMYLDPIKVTILTPGMSELGNMAEEGIPAALVAKFLDQRGIVVEKTGPYNLLFLFSI
GIDKTKAMSVLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQTLAQGIHQLILQ
HDLPRLMLKAFDVLPEMKMTPHQAFQRQVKGQVETVDIRELVGRISANMILPYPPGVPVV
MPGEMITEESRSVLDFLLMLCTIGRHYPGFETDIHGATLTDDGRYLVRVLREDDEG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
ttgaatattattgcgatcatgggaccgcacggcgctttctacaaagatgagcctattcgc
gaactggatgctgccctcaagctgcaaggcttccaaaccgtttaccccaataatgccagc
gacctgctgaagttgattgaacacaatccgcgtatctgcggtgtgatttttgactgggac
gattacagtctggcgctgtgtagcgacatcaatcagcttaatgaatatctgccgctctat
gccttcatcaacacccattcgcagatggatgtcagcatcaacgagatgcgcatggcgctg
cacttcttcgagtatgccctgagcgctgccgatgacatcgcgctgcatattcgtcagtac
accgatgagtacatcgataacatcacgccgccgctaactaaagcgttgttcacctacgtc
aaagagggcaaatacaccttctgcacgccgggtcacatgggcggcagcgccttccagaaa
agcccggtgggcagcctgttttatgacttctttggctcgaacaccttaaaagcggatgtc
tcgatctcggtcacggaattgggttcattgctcgatcacaccggcccgcatctggaagcg
gaggagtacgttgcgcgcacctttggcgctgagcaaagctacatggtgaccaacggcacc
tcgacctcgaacaaaatcgtcggcatgtatgcggcgcctgtgggtagcacggtgctgatt
gaccgcaactgccataaatcgctgacccatttgctgatgatgagcgacatcatcccaatc
tggctcaaaccgacgcgcaacgcgctgggcattctgggcggcattccgcagcgcgagttt
acgcgtgacagcatccagcaaaaggtcaacgccacgccgcgtgccagctggccggtgcat
gcggtaatcaccaactcaacctacgatggcctgctgtacaacacgcagttcatcaaacag
acgttggatgtgccatcgatccactttgattctgcgtgggtgccgtacaccaatttccat
ccgatctatgccggtaaaagcggcatgagcggcgatcgtattcccggcaaagtgatttat
gaaacgcaatcgacgcacaaactgttagcggcgttctcgcaggcttcgctgattcacatc
aaaggcgattacgacgagcacaccttcaacgaagcctacatgatgcacaccaccacctcg
ccgagctacgcgattgtctcgtcgattgaaaccgcggcggcgatgctgcgcggcaatccg
ggtaagcgactgatcaaccgctcggttgaacgtgcgctccatttccgtcgtgagattcaa
cgcttgcgggaagagtctgacggctggttctttgatatctggcagccggagcaggtcgat
caggccgaatgctggccgatccagccgggcgaggaggattggcacggtttcacccatgcc
gatcgcgatcatatgtatctcgatccgatcaaagtcaccattctgacgccgggcatgagc
gagctgggtaacatggcggaagagggcattccagccgcgctggtggcgaagttcctcgat
cagcgcggcatcgtggtggagaaaaccgggccatacaatctgctgttcctgttcagcatc
ggcatcgataaaaccaaagcgatgagcgtgctgcgtgggctgacggagtttaagcgtgca
tacgatctcaacctgcgcgtgaaaaacatgttgccggatctctacgctgaagatcccgac
ttctaccgcaacatgcgcattcaaacgctggcgcagggtattcatcaattgatcctgcaa
catgatctgcctcgcctgatgttgaaagcgttcgacgtactgccggagatgaagatgacg
ccgcatcaggcatttcagcgccaggtaaaaggtcaggtggaaacggtggatattcgcgaa
ctggtggggcgcatttccgccaacatgattctgccgtatccgcctggcgtgccggtggtg
atgccgggcgagatgatcaccgaagagagccgttccgtactcgattttctgctgatgctc
tgcaccatcggccggcactatcccggcttcgagaccgacattcacggtgcgacgttgacg
gacgatgggcgctatctggtgcgcgtattgcgtgaagatgatgaaggctaa
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