Pantoea sp. SO10: FCN45_19325
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Entry
FCN45_19325 CDS
T06053
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pans
Pantoea sp. SO10
Pathway
pans03030
DNA replication
pans03410
Base excision repair
pans03420
Nucleotide excision repair
pans03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pans00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCN45_19325 (polA)
03410 Base excision repair
FCN45_19325 (polA)
03420 Nucleotide excision repair
FCN45_19325 (polA)
03440 Homologous recombination
FCN45_19325 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pans03032
]
FCN45_19325 (polA)
03400 DNA repair and recombination proteins [BR:
pans03400
]
FCN45_19325 (polA)
Enzymes [BR:
pans01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FCN45_19325 (polA)
DNA replication proteins [BR:
pans03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FCN45_19325 (polA)
DNA repair and recombination proteins [BR:
pans03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FCN45_19325 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FCN45_19325 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QCP61409
LinkDB
All DBs
Position
complement(4166992..4169784)
Genome browser
AA seq
930 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLKSLLMQYQPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVKAMGLPLLAVSGVEADDVIGT
LALEAEKLGRPVLISTGDKDMAQLVTPAITLINTMTNTVLGPEEVEQKYGVPPALIIDFL
AMMGDSSDNIPGVPGVGEKTAQALLQGLGGMQSIYDNLDKVADLSFRGAKTMAAKLEQNR
DVAFLSYQLATIKTDVELDLTCDELVVNEPNVEALQTLFSRYEFKRWITDLQDGSWLQQG
KKSNAQAKKPQLSEPAAPAAQATSVLSADGYVTILDEATFAAWLKKLKSAELFAFDLETD
SLDTLSANIVGIGFAVAPGEAAYLPVAHDYLDAPDQLDRSEVLKQLKPLLEDGNAAKVGQ
NLKYDRGVLKNYDIELNGIKFDTMLESYCLNSVGGKHDMDSLAARWLNHKTVTFEEIAGK
GKNQLTFNQIAIEQAGHYAAEDADVTLQLHLKMWEKLEPEAGPKQVFEEIEMPLLKVISR
IERNGVLIDQNILAKHSQELTTRVAELELKAHELAGEPFNLSSPKQLQTILFEKQGIKPT
KKTPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPLTGRVHTSY
HQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAGSGNRIVAADYSQIELRIMAHLSQ
DKGLLDAFAQGEDIHRATASEVFGVALSKVSGEQRRSAKAINFGLIYGMSAFGLSRQLNI
GAGEAKKYMDLYFERYPGVLRYMEETRAKAAEKGYVETLDGRRLWLPDITSSNAIRRKAA
ERAAINAPMQGTAADIIKRAMIAVDGWLLEQKDDAVRMIMQVHDELVFEIRSDAVDSAIK
TIRDLMENSMKLDVPLQVEVGTGDNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaattgcagaaaatcccctgattctggtcgacggctcatcttatctgtaccgt
gcatatcatgcctttccgccgctaacgaacagtgcaggcgagccaactggcgccatgtat
ggtgtgctcaacatgttgaaaagcctgttgatgcagtatcagccaagccatgtggctgtg
gtcttcgatgcgaaaggcaaaaccttccgcgatgagctttttgaacactacaaatcgcac
cgtccgccgatgccagacgatctgcgtgcgcagattgagccgctgcatgaaatggtgaag
gcgatgggcctgccgctgttggcggtatctggcgttgaggcggatgacgttatcggtacg
ctggcgctagaggcggaaaaactcggccgtccggtgttgatcagcaccggcgataaagat
atggcgcagttagtgacgcctgcgatcaccttgatcaacaccatgacgaataccgtgctc
ggtccggaagaggtcgagcagaaatatggcgtgccgccagcactgattatcgatttcctc
gccatgatgggcgacagctccgataatattccaggcgtgccgggagtcggtgagaaaacc
gcgcaggcgttgctgcaaggcttgggcggtatgcagtcaatctatgacaatctcgataaa
gtggccgatctctcgttccgcggtgcgaaaaccatggcggcgaagctggagcaaaatcgc
gacgtcgcgttcctgtcttatcagctggcaaccatcaaaaccgacgttgagttggatctg
acctgcgatgagcttgtcgtcaatgaacctaatgtcgaagcgctgcaaaccttgtttagc
cgttatgaatttaagcgctggatcacggatttgcaggatggttcatggctgcaacaaggt
aagaagagcaacgcgcaggctaagaaaccgcagctcagcgaacctgctgcgcccgctgcc
caagcgaccagcgtgctctctgcggatggctacgtcactatcctcgatgaagcgacattt
gccgcatggctcaaaaagctgaaaagcgccgagctcttcgctttcgatcttgagaccgac
tcgctggataccttaagcgccaatattgtcggcattggttttgccgtcgcgccgggcgaa
gcagcttatctgccggttgcccatgattatctggatgcgccagatcagctggatcgcagc
gaagtgctgaagcagctaaaaccgctgctggaagatggcaacgcggcgaaggttggtcag
aatctcaaatacgatcgcggcgtgctgaagaattacgacattgaactgaacggcatcaaa
ttcgacaccatgctggaatcttattgcctgaacagcgtgggcggaaaacacgatatggat
agtctggccgcgcgctggctaaaccataaaacggtgactttcgaagagatcgcgggtaaa
ggtaaaaatcagctcacttttaatcagattgctatcgaacaagcgggccactacgcggcg
gaagatgccgatgtcacgctgcaattgcatctgaaaatgtgggagaaactggagccggaa
gcggggccgaaacaggtatttgaagagatcgaaatgccgttgttgaaggtgatatcgcgg
attgagcgcaacggcgtgctgattgaccagaatatcctggccaaacactcgcaggagctg
accacgcgtgtggccgagctggagctgaaagcgcacgagctggcaggcgaaccgtttaac
ctctcttcacctaaacagctgcaaaccattttgtttgaaaagcagggtattaaaccgacc
aagaaaacgccgggcggcgcgccgtcgaccagcgaagaagtgctggctgaactggctctc
gattatccactgcctaaagtaattctggaacatcgtggtttatcaaagttgaaatcgact
tacaccgataagctgccactgatgatcaatccgcttaccggccgcgtacatacatcctat
catcaggcggtaacggcgacgggacgactctcgtctaccgatcctaacctgcagaatatc
ccggtgcgcaacgaagaagggcgccgaatccgccaggcgtttatcgccggatcgggcaat
cgcattgttgccgcggactactcacagattgaactgcgtatcatggcgcatctgtcgcaa
gacaaaggcctgctggatgcgtttgcccagggcgaagatatccaccgtgccaccgcatca
gaagtgtttggtgtggcgttaagcaaagtttcaggtgagcagcgtcgcagtgccaaggcg
atcaactttggtctgatctacggaatgagcgcgtttggtctttcccgccagctcaatatc
ggtgcgggtgaggcgaagaaatacatggatctctactttgaacgctatccgggcgtgctg
cgttatatggaagagacgcgcgcgaaggcagcagagaaaggctatgtagaaacgctcgat
ggtcgtcgtttgtggctgcctgatatcacctccagcaatgccattcgtcgtaaagcggcg
gagcgagcagcgattaatgccccaatgcaaggcacggcagcagacatcatcaaacgcgcg
atgattgcggtggatggctggctgttggagcaaaaagacgatgccgtgcgcatgattatg
caggtacacgatgaactggtgtttgagatccgcagcgatgcagtggatagcgccattaag
accatccgtgatctgatggagaacagcatgaagctggatgtgccgctgcaggtggaagta
ggcaccggcgataactgggatgaggcacactga
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