Phreatobacter aquaticus: E8L99_17505
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Entry
E8L99_17505 CDS
T09827
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
paqt
Phreatobacter aquaticus
Brite
KEGG Orthology (KO) [BR:
paqt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paqt03009
]
E8L99_17505 (rimO)
Enzymes [BR:
paqt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E8L99_17505 (rimO)
Ribosome biogenesis [BR:
paqt03009
]
Prokaryotic type
ribosomal protein modification factors
E8L99_17505 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QCK87426
UniProt:
A0A4D7QPB9
LinkDB
All DBs
Position
complement(3688223..3689533)
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AA seq
436 aa
AA seq
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MTAAPKISFVSLGCPKALVDSERIITRLRAEGYDLSRTHQGADLVLVNTCGFLDSAKAES
LAAIGDALKDNGRVIVTGCMGAEPEQIRAVHPSVLAISGPQQYESVLAAVHEAVPPQHKP
FLDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPLGEVMVEAEKLVAA
GVKEIMVISQDTSAYGVDVKYAESRWRDRNWRTKFLDLAQALGELGVWVRMQYVYPYPHV
DEVIPLMAAGKILPYIDIPFQHAHPDVLRRMKRPAHQEKTAERIRRWRDMCPDLTIRSTF
ITGFPGETEEEFQFLLDWLDEVGLDRVGCFKYEPVAGATSNDLPDHVAPEVMDRRWHRFM
KKQAEISAKRLKRKVGTRQQVMVDELGTTVVKARSKGDAPEIDGAVYIHTKRKLQLGEFV
TVKIDRATEYDLHASL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgcccctaagatttccttcgtttcgctcgggtgcccgaaggcgcttgttgac
agcgaacgcatcatcacccggctgcgtgccgaaggctatgacctgtcgcgcacgcatcag
ggcgccgacctggtactggtcaacacctgcggtttcctcgacagtgcgaaggctgagagc
ctggcggcgatcggcgatgcactgaaggacaatggccgggtcatcgtcaccggctgtatg
ggcgccgagccggagcagattcgcgcggttcacccctccgtgctcgcgatcagcggaccg
cagcaatatgaaagcgtgcttgcggctgtccatgaagccgtaccgccgcagcacaagccg
ttcctcgatctggtgccgccgcaggggatcaagctgacgccgcgccactacgcctatctg
aagatttccgaaggctgcaacaatcgctgcacgttctgcatcattccgaagctgcgcggc
gatctcgtgtcacgcccgctgggcgaggtgatggtcgaggcggagaagctggtcgccgcc
ggcgtcaaagaaatcatggtgatcagccaggatacatccgcctatggcgtcgatgtgaaa
tatgccgaaagccgctggcgcgaccggaactggcggacgaagttcctggacctcgcccag
gccctcggcgagctcggcgtctgggtgcggatgcaatatgtctatccctacccgcatgtc
gacgaggtcatcccgttgatggccgcgggcaagatcctcccctatatcgacattcccttc
cagcatgcccatcccgacgtgctcaggcgcatgaaacgtccggcgcatcaggaaaagacc
gctgagcgtatccgtcgctggcgcgacatgtgccccgacctgacgatccgctccacattc
atcacaggctttcccggcgagaccgaagaggagttccagttcctgctcgactggctcgac
gaggtcggcctcgatcgcgttggctgcttcaaatacgagccggttgctggcgcgacctcg
aacgacctgccagatcacgtggcgcccgaggtcatggaccgccggtggcaccgcttcatg
aagaagcaggccgaaatttcggccaaacgcctgaagcgcaaggtgggtacccgccagcag
gtgatggtcgacgagctcgggacaaccgtcgtcaaggctcgctccaagggcgatgcgccg
gagatcgacggtgccgtctacatccacaccaagcgcaagcttcagcttggcgaattcgtg
actgtcaaaatcgaccgggcgacggaatacgatctccacgccagcctgtga
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