Pectobacterium aquaticum: DMB82_0015190
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Entry
DMB82_0015190 CDS
T07653
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
paqu
Pectobacterium aquaticum
Pathway
paqu00730
Thiamine metabolism
paqu01100
Metabolic pathways
paqu01240
Biosynthesis of cofactors
paqu04122
Sulfur relay system
Module
paqu_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
paqu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DMB82_0015190 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DMB82_0015190 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paqu03016
]
DMB82_0015190 (thiI)
Enzymes [BR:
paqu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DMB82_0015190 (thiI)
Transfer RNA biogenesis [BR:
paqu03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DMB82_0015190 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
UEM38491
LinkDB
All DBs
Position
complement(3259898..3261346)
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDESQR
EAIRDALTRIPGIHHILEVEDHAYTDVHNIFEQALALYRERLEGKTFCVRVKRRGKHEFS
SQDVERYVGGGLNQHIDTARVNLTTPQVTVHLEIEQDRLLLIKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
AIDFDPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKQARELGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEEGHFDFAILDRVVSEARNIDIREIAEQTKQDVVEVETVASFAPTDVLLDIRAPDEQD
DKPLELDQVEIKSLPFYKLGTQFGDLDQSKTYLLYCERGVMSRLQALYLREQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaagagccaatctgtgcggttg
cgctttatcaagattctcaccggaaacattcgcaacgtattaaaacactatgatgaaacg
ctggcggttgtccgtcactgggatcatatcgaagttcgggccaaagacgaaagccagcgt
gaggcaattcgtgatgcgctgacaagaattccgggtattcaccatattctagaagttgaa
gatcacgcctataccgacgtgcacaatatctttgaacaagcgctggcgttgtaccgtgag
cggttggaaggcaagacgttttgtgtgcgagtgaaacgccgtggtaagcatgaattcagc
tcacaggacgtagaacgctacgtcggcggcggtttgaaccagcacattgatacggcgcga
gttaacctcacgacaccgcaggtcaccgtgcatctggaaatcgagcaggatcgtctactg
ctgattaaagggcgctatgaaggtatcggcggtttcccgattggtactcaggaagatgtg
ctgtcattgatttccggtggttttgattccggcgtctccagctatatgttgatgcgtcgc
ggatgccgtgtgcactactgcttcttcaacctcggtggtgcagcccatgagattggggtg
aaacaggtcgcacactatctgtggaaccgctttggtagctcacatcgggtgcgttttatt
gctatcgacttcgatcctgttgtgggtgaaattctcgagaaggtcgacgatggccagatg
ggcgtcgtgctgaagcgcatgatggtgcgcgcggcctccaaagttgctgagcgttacggt
gttcaggcgttggtgactggtgaagcgttagggcaggtgtccagccagacgctgaccaac
ctgcgtttgatcgataacgcctctgacacgctgattctgcgtccgctgatttctcacgat
aaagaacatattatcaaacaggctcgtgaactggggacggaagatttcgccaaaacgatg
ccggaatactgtggtgtgatctccaaaagcccgacggtgaaggcggtaaaagcgaagatc
gaggccgaagaaggccactttgattttgctatcctggatcgcgtggtgagtgaagcccgg
aatattgatatccgtgagatcgccgagcagaccaaacaagacgtggttgaagtcgaaacg
gtcgcgtcgtttgcgccaaccgacgtgctgctggatatccgtgcgccggatgaacaggac
gataagccgcttgagctggatcaggtcgaaataaaatctttaccgttctacaagctgggt
acgcagtttggcgatttggatcagagcaaaacctatctgctttactgcgagcgtggcgtg
atgagccgcttgcaggcgctgtacctgcgtgagcaaggtttcagcaatgtgaaggtatac
cgtccgtaa
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