Paraburkholderia aromaticivorans: CJU94_09960
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Entry
CJU94_09960 CDS
T05169
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb00540
Lipopolysaccharide biosynthesis
parb01100
Metabolic pathways
parb01250
Biosynthesis of nucleotide sugars
Module
parb_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CJU94_09960 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
parb01005
]
CJU94_09960 (rfaD)
Enzymes [BR:
parb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CJU94_09960 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
parb01005
]
Core region
CJU94_09960 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ASV98471
UniProt:
A0A248VIV5
LinkDB
All DBs
Position
1:2169089..2170081
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AA seq
330 aa
AA seq
DB search
MTLIVTGAAGFIGSNLVKALNERGEQRIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVER
FKRGDFGKVRAIFHEGACSDTMETDGRYMMDNNFRYSREVLDVCLAQDVQFLYASSAATY
GGSSRFVEEREVEQPLNVYGYSKFLFDQVIRRVLPTAKSQIAGFRYFNVYGPRETHKARM
ASVAFHNFNQFRAEGKVKLFGEYNGYAAGEQTRDFVSVEDVVKVNLFFFDNPDKSGIFNL
GSGRAQPFNDIASTVVNTLRTLNNEPALSLADQVQRGLIEYIPFPDALRGKYQCFTQADQ
SKLRAAGYDAPFLSVQEGVDRYVRWLFGQV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcatcgtcaccggcgcggccggtttcatcggcagcaatctcgtgaaggcgctc
aacgagcgcggtgaacaacgcatcatcgcggtcgacaatctgacgcgcgcggacaaattc
aagaacctcgtcgactgcgagatcgacgactacctcgacaagaccgagttcgtcgaacgc
ttcaagcgcggcgacttcggcaaggtgcgtgcgattttccacgaaggcgcctgttcggac
acgatggaaaccgacggccgctacatgatggacaacaacttccgctatagccgcgaggtg
ctcgacgtctgcctcgcgcaggacgttcagttcctgtacgcgtcgtcggcggcaacgtat
ggcgggtcgagccgtttcgtcgaagaacgcgaagtcgagcagccgctgaacgtctatggc
tactcgaagttcctgttcgatcaggtgatccggcgcgtgctgcccaccgcgaagagccag
attgccggcttccgctatttcaacgtgtacgggccgcgcgaaacgcacaaggcgcgcatg
gcgtcggtggcattccacaacttcaaccagttccgcgccgagggcaaggtcaagctgttc
ggcgaatacaacggttatgccgcgggcgaacagacgcgcgacttcgtttcggttgaagac
gtggtgaaggtcaacctgttcttcttcgacaatccggacaagtcgggcatcttcaatctc
ggcagcggccgcgcgcaaccgttcaacgacatcgccagcacggtggtcaatacgctgcga
acgctgaacaacgagccggcgctgtcgctcgcggatcaggtgcagcgcgggctgatcgaa
tacattccgttccccgacgcgttgcgcggcaagtaccagtgcttcacgcaggcggaccaa
tcgaagctgcgcgcggccggctacgacgcgccgtttctgagcgtgcaggaaggggtcgat
cgctacgtacgttggctattcggccaggtgtaa
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