Polynucleobacter arcticus: DN92_05670
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Entry
DN92_05670 CDS
T09901
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pard
Polynucleobacter arcticus
Brite
KEGG Orthology (KO) [BR:
pard00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pard03009
]
DN92_05670
Enzymes [BR:
pard01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DN92_05670
Ribosome biogenesis [BR:
pard03009
]
Prokaryotic type
ribosomal protein modification factors
DN92_05670
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QKM60568
UniProt:
A0A6M9PMK7
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Position
complement(1118571..1119929)
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AA seq
452 aa
AA seq
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MAGKVGFVSLGCPKALVDSELILTQLSAEGYETAKDYAGADLVVVNTCGFIDSAVEESLA
AIGEALSANGKVIVTGCLGARKNADGSDLIQSIHPKVLAVTGPHATEEVMQAIHLHLPKP
HDPFTDLLPPIGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLLEAKRL
FESGVKELLVVSQDTSAYGVDVQYRTGFWDGKPVKTRMFDLVNALNLIAREHQAWVRLHY
VYPYPHVDDILPLMAEFSEYGFGVLPYLDIPLQHAHPDVLKRMKRPASGEKNLERIQAWR
AACPDLVIRSTFIAGFPGETEEEFQYLLDFLDEAQIDRAGCFAYSPVDGATANALDNPVP
IEIREERRARFMAKAEEISVKRLAKKVGKRIQVLIDRVDESGGIGRTTGDAPEIDGLVRV
LPPSKPSKRFRAGEIIKVMVISSQGHDLIAET
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggctggaaaagtaggttttgtttccttgggttgtcccaaggcattggttgactctgaa
ttgattctgactcaattgagtgccgagggctatgagacggctaaagattacgctggtgca
gatctcgtggtggtgaacacttgcggctttattgattctgcagttgaggagagcctagcg
gcgattggtgaggcgctttcagcgaacggcaaggtaattgtgaccggttgtctgggtgcc
cgtaaaaatgcggatggcagtgatctcattcagagtattcatccaaaagtcttggcagtt
actggcccgcatgctacagaagaggtgatgcaggctattcatttgcatctacctaagcca
catgatccttttacggatctactcccaccaattggtgtgaagttaacgccaaagcattat
gcgtatttaaaaatctctgagggctgcaatcaccgctgcactttttgcattattccgagc
atgcgtggcgatttagtctcccgaccaatcggagaggtgctgcttgaggccaaacgatta
tttgagtcaggcgtgaaagaattgctggttgtttcgcaagatacgagtgcctatggcgtt
gacgttcaataccgtaccggcttttgggatggcaagcctgtgaagactcggatgtttgac
ttggtaaacgcgctaaatcttattgcacgagagcatcaagcctgggtacgcctgcattat
gtttatccctatcctcatgtggatgacattttgcccttgatggcagagttttctgagtac
ggtttcggagtattgccttatttagatattccattgcagcatgcccatcctgatgtgctc
aagcgcatgaagcgtcctgcgagtggtgagaaaaatttggaacgcattcaagcttggcgc
gcagcatgtccagacttagtcattcgaagtacttttatcgcagggtttcctggggagacc
gaggaagaatttcagtatctgctggatttcctagatgaggcccagattgaccgtgctggc
tgttttgcttactcgcccgttgatggggcaacagctaatgcactagacaatcccgtacca
attgagattcgtgaagagcgtcgcgcacgctttatggccaaggcagaggaaatttcggtc
aagcgactggctaaaaaggtcggtaaacgcattcaggttctgattgatcgagtagacgaa
tctggtggtattggtcgaactactggtgatgcccctgaaatagatggtttagtgcgggtt
ttacccccaagcaagccatctaagcgcttccgtgctggtgaaatcatcaaagtgatggtg
attagctcccaagggcatgacctaatagccgaaacttga
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