Parageobacillus sp. KH3-4: PspKH34_11390
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Entry
PspKH34_11390 CDS
T08468
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg00900
Terpenoid backbone biosynthesis
parg01100
Metabolic pathways
parg01110
Biosynthesis of secondary metabolites
Module
parg_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PspKH34_11390
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
parg01006
]
PspKH34_11390
Enzymes [BR:
parg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PspKH34_11390
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PspKH34_11390
2.5.1.29 geranylgeranyl diphosphate synthase
PspKH34_11390
Prenyltransferases [BR:
parg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PspKH34_11390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDG46578
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All DBs
Position
1148663..1149556
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AA seq
297 aa
AA seq
DB search
MNRAEVERFLQEQKQRLENVLPRYITRMAAPETIKRAMAYSLEAGGKRIRPLLLFATLHS
FGKKPDIGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLL
TYAFQVIAEANDARISPMTKIRLIEELAKAAGPEGMVAGQVADIEGEGKQLSLEQLEYIH
RHKTGKMLQYSVLAGALLAGAKDEQLRHLDMFASHLGLAFQIRDDILDIEGSEEKIGKRV
GSDIENKKVTYPSLLTISGAKEKLSFHIAEAKRYLQKAEVDDSVLSYICDLVATRDH
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcgggcggaagtagaacggtttttacaagagcaaaagcagcgtttggaaaatgtt
ttgccgcgttatattacaagaatggctgctcctgaaacgattaaacgggcgatggcttat
tcgctggaggcagggggaaagcgcatccgtccgcttctgttgtttgcgacgttgcattcg
ttcggaaaaaagccggatattggacttccggtggcgtgcgccattgagatgattcataca
tattcgctgattcacgatgatttgccgagcatggataacgatgatttgcggcgcggcaag
ccgacgaatcataaagtgtttggggaagcgatggccattttggcgggcgatggattgctc
acttacgcgtttcaagtgatcgctgaagccaatgatgcccgcatttctccaatgacaaaa
attcggctaatcgaagaactggcgaaagcggcgggaccggaaggaatggtggcgggacaa
gttgccgatatcgaaggagaagggaagcagctttcgcttgaacagctggaatatattcat
cgccataaaacagggaaaatgctgcaatacagcgtattggctggcgcgctccttgcaggc
gcgaaagacgaacagctgcgccatctcgatatgtttgcctcccatctcggtctcgctttt
caaattcgcgatgatattcttgatattgagggatcagaagaaaaaattggcaaacgggtt
ggcagcgacattgaaaacaaaaaagtgacatatccatcgcttttaacgatttccggggca
aaagaaaagctatcattccatatcgcagaagcaaaacgttatttgcaaaaagcagaagtc
gacgacagcgtactaagttatatttgtgatttggtcgcgacgcgtgatcattaa
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