Parageobacillus sp. KH3-4: PspKH34_37030
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Entry
PspKH34_37030 CDS
T08468
Name
(GenBank) hypothetical protein
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
parg
Parageobacillus sp. KH3-4
Pathway
parg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
parg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PspKH34_37030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parg03021
]
PspKH34_37030
03400 DNA repair and recombination proteins [BR:
parg03400
]
PspKH34_37030
Transcription machinery [BR:
parg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PspKH34_37030
DNA repair and recombination proteins [BR:
parg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PspKH34_37030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
PhdYeFM_antitox
DUF2087
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
BDG49142
LinkDB
All DBs
Position
complement(3703410..3703958)
Genome browser
AA seq
182 aa
AA seq
DB search
MSLQQYSQEELREMSFVELASLVLSEKKEALSFQQLVNEVAALIGLSEQEIKKRLAQYYT
DLNIDGRFICVGENVWGLRVWYPFDQTEDETVTITKPKKKKKAIDDYDDYDEIMDDEDID
YDDLDEFDEDVLDPDEDELLEDDEFGLGDEAFDEDLLGDDEFDLGDDELDEDLDIDDPEE
EE
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttgcagcaatactctcaagaggaattgcgagaaatgtcgtttgtcgaactcgct
agtctcgttttatctgagaaaaaggaagcgttatcgtttcaacaacttgttaacgaagtt
gctgcgctgatcggtttgtctgagcaagagatcaaaaaacgtcttgctcaatattataca
gatttaaatattgacggccgttttatttgtgtcggtgaaaatgtttggggcttgcgcgtt
tggtatccgtttgatcaaacagaagatgaaacggtaacgatcaccaagccgaagaagaag
aaaaaagcgattgatgattacgatgactacgatgaaatcatggatgatgaagatatcgat
tatgatgatcttgatgaattcgacgaagacgtgctggatccagatgaagacgaacttctt
gaagatgacgaatttggcctcggcgatgaagcgtttgatgaagaccttcttggtgacgat
gaatttgacttaggggatgacgaactggatgaagatttagatatcgatgatccggaagaa
gaggaataa
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