Pectobacterium aroidearum: I2D83_20980
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Entry
I2D83_20980 CDS
T07244
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pari
Pectobacterium aroidearum
Pathway
pari00860
Porphyrin metabolism
pari01100
Metabolic pathways
pari01110
Biosynthesis of secondary metabolites
pari01120
Microbial metabolism in diverse environments
pari01240
Biosynthesis of cofactors
Module
pari_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
pari_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
I2D83_20980 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pari04147
]
I2D83_20980 (hemB)
Enzymes [BR:
pari01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
I2D83_20980 (hemB)
Exosome [BR:
pari04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
I2D83_20980 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
QPI42844
LinkDB
All DBs
Position
complement(4704357..4705379)
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AA seq
340 aa
AA seq
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MSTAFPGTFPGRRMRRIRRHDFSRRLVAENQLTVNDLIYPVFVMEGTNHRQEVPSMPGVY
RMTIDVLLKEAEEIAKLGVPVLSLFPVVEADKKSLYAEEAYNPDGLVPRTIRALKDAVPE
LGLLTDVALDPYTTHGQDGIIDEDGYVVNDVTKEILVRQALSHAEAGAEIIAPSDMMDGR
IGAIRDMLEAQNLINTQIMAYSAKYASCYYGPFRDAVGSASNLKGGNKKTYQMDPANSDE
ALQEIAQDLQEGADMVMVKPGMPYLDVVRRVKDTFGVPTFAYQVSGEYAMHMAAIQNGWL
QEQPVVMESLLCFKRAGADGVLTYFAKRVAQWLHDQHMQR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcttttcccggcacttttcccggccgacgtatgcgtcgcattcgtcgccat
gatttcagccgtcgccttgttgctgagaatcaactgacggtgaacgatttgatttatccc
gttttcgtgatggaagggacaaatcatcgtcaggaagtgccctcaatgccgggggtatac
cggatgactatcgacgtgcttctgaaagaagccgaagagatcgctaagcttggcgtgccg
gtgctgtcgctgttccccgttgttgaagcggataagaaatcgctctatgccgaagaagcc
tataacccggatggcttggtgccccgtacgatccgcgcgctgaaagatgccgttcctgag
ttgggtttgctgacggatgtggcgctcgatccctacacgacgcatgggcaggacgggatt
attgatgaagacggttatgtggttaacgatgtcaccaaggagattttggtgcgtcaggcg
ttgtctcatgctgaagccggagccgaaattattgcgcccagcgatatgatggatggtcgt
atcggtgctatccgcgacatgcttgaagcgcagaacctgatcaatacccagatcatggcg
tactcggctaagtatgcatcgtgttactacgggcctttccgcgacgccgtgggttcagcc
agcaatctgaaaggtggcaacaagaaaacctaccagatggatcccgccaacagcgatgaa
gccctgcaggaaattgcgcaggatttgcaggaaggtgcggatatggtgatggtgaaaccg
ggcatgccttatctggatgtggtgcgtcgcgtcaaggatacgttcggcgtaccgaccttt
gcctatcaggtctctggcgaatatgcgatgcacatggcggcgattcaaaacggctggtta
caggaacaaccagtggtgatggagtctctactgtgctttaaacgtgcgggtgcagatgga
gtgctgacctattttgccaaacgtgtcgctcagtggctgcacgatcaacacatgcaacgc
taa
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